首页> 中文期刊> 《实用口腔医学杂志》 >IRF6基因 SNPs 与新疆维吾尔族非综合征型唇腭裂相关性研究

IRF6基因 SNPs 与新疆维吾尔族非综合征型唇腭裂相关性研究

         

摘要

目的:探讨 IRF6基因 rs2235371、rs2013162、rs2235377位点单核苷酸多态性与新疆地区维吾尔人群非综合征型唇腭裂(NSCL/P)的相关性。方法:试验组为新疆地区世居维吾尔族 NSCL/P 患者100例,对照组为60例因上呼吸道感染而住院的儿童,用二代测序技术对血样进行 DNA 测序,将测序结果与基因组数据库进行比较,进行遗传学分析。结果:与对照组相比,NSCL/P 组 rs2235371、rs2013162、rs2235377位点基因型及等位基因频率分布差异无统计学意义(P >0.05)。以上3个位点位于同一个单倍体域,rs2235371和 rs2235377等2个位点存在较强的连锁不平衡(r2=0.949,D'=0.974)。单倍体域里推测出最常见的单倍体型共3种:CCT >CAT >TAC,3种单倍体型在病例组与对照组间分布差别无统计学意义(P >0.05)。结论:IRF6基因 rs2235371、rs2013162、rs2235377位点 SNPs 与新疆维吾尔族人群唇腭裂发病可能存在相关性。%Objective:To study the association between rs2235371,rs2013162,rs2235377 SNPs in interferon regulatory factor 6 (IRF6)gene and non-syndromic cleft lip with or without cleft palate(NSCL/P)in Xinjiang Uyghur population.Methods:100 Uyghur NSCL/P patients from Xinjiang were included in the case group and 60 Uyghur inpatients with upper respiratory tract infection were se-lected in the control group.Next,generation sequencing was used,DNA sequencing results were compared with the information on the genome database and genetic analysis were made.Results:There were no significant differences in the frequency distribution of both genotypes and alles when the cases were campared with the controls at the rs2235371,rs2013162 and rs2235377 loci(P >0.05). Above three loci were located in the same block,rs2235371 and rs2235377 loci presents the strong linkage disequilibrium(r2 =0.949, D'=0.974).Possible haplotypes were:CCT >CAT >TAC,and there was no significant difference between the cases and controls in haplotype distribution(P >0.05).Conclusion:Polymorphisms of rs2235371,rs2013162 and rs2235377 in IRF6 gene may be associ-ated with NSCL/P in Xinjiang Uygur people.

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