首页> 美国卫生研究院文献>Philosophical Transactions of the Royal Society B: Biological Sciences >The surface management system (SuMS) database: a surface-based database to aid cortical surface reconstruction visualization and analysis.
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The surface management system (SuMS) database: a surface-based database to aid cortical surface reconstruction visualization and analysis.

机译:表面管理系统(SuMS)数据库:基于表面的数据库可帮助皮层表面重建可视化和分析。

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摘要

Surface reconstructions of the cerebral cortex are increasingly widely used in the analysis and visualization of cortical structure, function and connectivity. From a neuroinformatics perspective, dealing with surface-related data poses a number of challenges. These include the multiplicity of configurations in which surfaces are routinely viewed (e.g. inflated maps, spheres and flat maps), plus the diversity of experimental data that can be represented on any given surface. To address these challenges, we have developed a surface management system (SuMS) that allows automated storage and retrieval of complex surface-related datasets. SuMS provides a systematic framework for the classification, storage and retrieval of many types of surface-related data and associated volume data. Within this classification framework, it serves as a version-control system capable of handling large numbers of surface and volume datasets. With built-in database management system support, SuMS provides rapid search and retrieval capabilities across all the datasets, while also incorporating multiple security levels to regulate access. SuMS is implemented in Java and can be accessed via a Web interface (WebSuMS) or using downloaded client software. Thus, SuMS is well positioned to act as a multiplatform, multi-user 'surface request broker' for the neuroscience community.
机译:大脑皮层的表面重建越来越多地用于皮层结构,功能和连通性的分析和可视化。从神经信息学的角度来看,处理与表面相关的数据带来了许多挑战。这些包括常规查看表面的多种配置(例如膨胀图,球体和平面图),以及可以在任何给定表面上表示的实验数据的多样性。为了应对这些挑战,我们开发了一种表面管理系统(SuMS),可以自动存储和检索与表面相关的复杂数据集。 SuMS为分类,存储和检索许多类型的与地面相关的数据和关联的体积数据提供了一个系统的框架。在此分类框架内,它用作版本控制系统,能够处理大量的表面和体积数据集。借助内置的数据库管理系统支持,SuMS提供了对所有数据集的快速搜索和检索功能,同时还集成了多个安全级别来规范访问。 SuMS用Java实现,可以通过Web界面(WebSuMS)或使用下载的客户端软件进行访问。因此,SuMS位置优越,可以充当神经科学界的多平台,多用户“表面请求代理”。

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