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Statistical Complexity Analysis of Turing Machine tapes with Fixed Algorithmic Complexity Using the Best-Order Markov Model

机译:使用最佳阶Markov模型的固定算法复杂度的图灵机带的统计复杂性分析

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摘要

Sources that generate symbolic sequences with algorithmic nature may differ in statistical complexity because they create structures that follow algorithmic schemes, rather than generating symbols from a probabilistic function assuming independence. In the case of Turing machines, this means that machines with the same algorithmic complexity can create tapes with different statistical complexity. In this paper, we use a compression-based approach to measure global and local statistical complexity of specific Turing machine tapes with the same number of states and alphabet. Both measures are estimated using the best-order Markov model. For the global measure, we use the Normalized Compression (NC), while, for the local measures, we define and use normal and dynamic complexity profiles to quantify and localize lower and higher regions of statistical complexity. We assessed the validity of our methodology on synthetic and real genomic data showing that it is tolerant to increasing rates of editions and block permutations. Regarding the analysis of the tapes, we localize patterns of higher statistical complexity in two regions, for a different number of machine states. We show that these patterns are generated by a decrease of the tape’s amplitude, given the setting of small rule cycles. Additionally, we performed a comparison with a measure that uses both algorithmic and statistical approaches (BDM) for analysis of the tapes. Naturally, BDM is efficient given the algorithmic nature of the tapes. However, for a higher number of states, BDM is progressively approximated by our methodology. Finally, we provide a simple algorithm to increase the statistical complexity of a Turing machine tape while retaining the same algorithmic complexity. We supply a publicly available implementation of the algorithm in C++ language under the GPLv3 license. All results can be reproduced in full with scripts provided at the repository.
机译:生成具有算法性质的符号序列的源极可能在统计复杂度中不同,因为它们创建了遵循算法方案的结构,而不是假设独立性的概率函数生成符号。在图灵机的情况下,这意味着具有相同算法复杂度的机器可以创建具有不同统计复杂度的胶带。在本文中,我们使用基于压缩的方法来测量具有相同数量和字母表的特定图灵机带的全局和局部统计复杂度。两种措施都是使用最佳阶Markov模型估算的。对于全球措施,我们使用归一化压缩(NC),而对于本地措施,我们定义和使用正常和动态复杂性配置文件来量化和定位较低和更高的统计复杂地区。我们评估了我们对合成和实际基因组数据的方法的有效性,表明它宽容增加了版本和阻塞排列的速率。关于磁带的分析,我们将两个区域的统计复杂性更高的模式定位为不同数量的机器状态。对于小规则周期的设置,我们表明这些模式由磁带幅度的减小产生。此外,我们与使用算法和统计方法(BDM)的措施进行了比较,以便分析磁带。当然,鉴于磁带的算法性质,BDM高效。然而,对于较高的州,BDM通过我们的方法逐渐近似。最后,我们提供了一种简单的算法来提高图灵机带的统计复杂性,同时保持相同的算法复杂度。我们在GPLv3许可证下提供了在C ++语言中公开实施的算法。所有结果都可以满足存储库中提供的脚本。

著录项

  • 期刊名称 Entropy
  • 作者单位
  • 年(卷),期 2020(22),1
  • 年度 2020
  • 页码 105
  • 总页数 26
  • 原文格式 PDF
  • 正文语种
  • 中图分类
  • 关键词

    机译:图灵机;信息理论;统计复杂性;算法复杂性;计算复杂性;马尔可夫模型;基于压缩的分析;

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