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Sampling Network Motif Detection Algorithm Based on Subgraph Extending and Subgraph Support Value

机译:基于子图扩展和子图支持值的采样网络图形检测算法

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摘要

Network motifs play an important role in biological networks but the detection is computing complex and time consuming. Sampling method has been used in network motif detection to decrease calculated amount, however the inevitable sampling error influences the result validity seriously. In order to reduce the sampling error, a sub graph extending method is introduced to improve the computation performance and a sub graph support value is proposed to get more potential topology information of the network and the sub graph support value as a parameter is used to calculate the sub graph concentration of network. The experiment results indicated that the using of sub graph support value reduced the sampling error and this study achieved better computing performance and sampling stability.
机译:网络主题在生物网络中起着重要的作用,但检测运算复杂且耗时。网络主题检测中采用了采样方法来减少计算量,但是不可避免的采样误差会严重影响结果的有效性。为了减少采样误差,引入了子图扩展方法以提高计算性能,提出了子图支持值以获取更多的网络潜在拓扑信息,并以子图支持值作为参数进行计算。网络的子图集中。实验结果表明,使用子图支持值可以减少采样误差,从而提高了计算性能和采样稳定性。

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