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Effect of increasing accuracy of genomic evaluations on economic efficiency of dairy cattle breeding programmes

机译:基因组评估准确性的提高对奶牛育种计划经济效益的影响

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The aim of this study was to evaluate the effect of increasing accuracy of genomic selection, achieved by larger training set, on the economic efficiency of breeding programme in dairy cattle. A deterministic model compatible with the Iranian Holstein population, was developed. Gene flow method was applied to estimate genetic and economic parameters of simulated programme over 20 years for milk production. By increasing the number of individuals in training set from 500 to 3500, the accuracy of genomic evaluations increased from 0.62 to 0.82. However, maximum economic efficiency (13.83) was achieved at the accuracy of 0.72 using 1000 individuals in the training set, indicating that the genomic accuracy has an optimum value with respect to economic efficiency. A range of genotyping costs, from 50 to US$400, were examined and the corresponding optimum accuracy was estimated. Although the genotyping cost has a negative effect on the economic efficiency, but it had a minor effect on the optimum accuracy. Varying the heritability from 0.18 to 0.36 did not affect the optimal accuracy. The results of this study demonstrated that achieving higher accuracies of genomic value through allocating more individuals in training set, would not necessarily lead to more economic efficiency. The effect of varying genotyping cost on optimal structure of genomic selection programme could be negligible. The optimal size of training set would not be affected by heritability, although the maximum economic efficiency of selection programme could be affected. View Correction
机译:这项研究的目的是评估通过扩大培训规模而提高基因组选择准确性对奶牛育种计划经济效益的影响。建立了与伊朗荷斯坦种群相容的确定性模型。应用基因流方法估算了模拟奶生产20年的遗传和经济参数。通过将受训人数从500增加到3500,基因组评估的准确性从0.62增加到0.82。但是,在训练集中使用1000个人在0.72的精度下实现了最高的经济效率(13.83),这表明基因组精度相对于经济效率具有最佳值。对基因分型成本的范围从50到400美元进行了检查,并估计了相应的最佳准确性。尽管基因分型成本对经济效率有负面影响,但对最佳精度影响不大。将遗传力从0.18更改为0.36不会影响最佳精度。这项研究的结果表明,通过在培训集中分配更多的个人来实现更高的基因组价值准确性,不一定会带来更高的经济效率。基因分型成本的变化对基因组选择程序的最佳结构的影响可以忽略不计。尽管选择程序的最大经济效率可能会受到影响,但是训练集的最佳规模不会受到遗传性的影响。查看校正

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