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Insights into the single cell draft genome of “ Candidatus Achromatium palustre”

机译:对“白色念珠菌”的单细胞草案基因组的见解

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“ Candidatus Achromatium palustre” was recently described as the first marine representative of the Achromatium spp. in the Thiotrichaceae - a sister lineage to the Chromatiaceae in the Gammaproteobacteria. Achromatium spp. belong to the group of large sulfur bacteria as they can grow to nearly 100?μm in size and store elemental sulfur (Ssup0/sup) intracellularly. As a unique feature, Achromatium spp. can accumulate colloidal calcite (CaCOsub3/sub) inclusions in great amounts. Currently, both process and function of calcite accumulation in bacteria is unknown, and all Achromatium spp. are uncultured. Recently, three single-cell draft genomes of Achromatium spp. from a brackish mineral spring were published, and here we present the first draft genome of a single “ Candidatus Achromatium palustre” cell collected in the sediments of the Sippewissett Salt Marsh, Cape Cod, MA. Our draft dataset consists of 3.6 Mbp, has a G?+?C content of 38.1?% and is nearly complete (83?%). The next closest relative to the Achromatium spp. genomes is Thiorhodovibrio sp. 907 of the family Chromatiaceae , containing phototrophic sulfide-oxidizing bacteria.
机译:最近,“ Candidatus Achromatium palustre”被描述为Achromatium spp的第一个海洋代表。在Thiotrichaceae-γ-变形杆菌属的Chromatiaceae的姐妹谱系中。铬属属于大型硫细菌群,它们可以生长到近100?μm的大小,并在细胞内存储元素硫(S 0 )。作为一个独特的功能,Achromatium spp。可以积累大量的方解石(CaCO 3 )胶体包裹体。目前,未知方解石在细菌中的积累过程和功能,以及所有的无色菌属。没有文化。最近,无色菌的三个单细胞基因组草图。发表了来自咸淡矿泉水的信息,在这里,我们介绍了在马萨诸塞州科德角Sippewissett Salt Marsh沉积物中收集的单个“白色念珠菌”细胞的基因组初稿。我们的草稿数据集由3.6 Mbp组成,G 3 + C含量为38.1%,几乎是完整的(83%)。相对于Achromatium spp而言最近的一个。基因组是Thiorhodovibrio sp。蓝藻科的907,含有光养性硫化物-氧化细菌。

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