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Renal Gene Expression Database (RGED): a relational database of gene expression profiles in kidney disease

机译:肾脏基因表达数据库(RGED):肾脏疾病中基因表达谱的关系数据库

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We present a bioinformatics database named Renal Gene Expression Database (RGED), which contains comprehensive gene expression data sets from renal disease research. The web-based interface of RGED allows users to query the gene expression profiles in various kidney-related samples, including renal cell lines, human kidney tissues and murine model kidneys. Researchers can explore certain gene profiles, the relationships between genes of interests and identify biomarkers or even drug targets in kidney diseases. The aim of this work is to provide a user-friendly utility for the renal disease research community to query expression profiles of genes of their own interest without the requirement of advanced computational skills. Availability and implementation: Website is implemented in PHP, R, MySQL and Nginx and freely available from http://rged.wall-eva.net. Database URL: http://rged.wall-eva.net
机译:我们提供了一个名为肾脏基因表达数据库(RGED)的生物信息学数据库,其中包含来自肾脏疾病研究的全面基因表达数据集。 RGED的基于Web的界面允许用户查询各种肾脏相关样本(包括肾细胞系,人肾脏组织和鼠模型肾脏)中的基因表达谱。研究人员可以探索某些基因概况,相关基因之间的关系,并确定肾脏疾病中的生物标志物甚至药物靶标。这项工作的目的是为肾脏疾病研究界提供一种用户友好的实用程序,以查询他们自己感兴趣的基因的表达谱,而无需高级的计算技能。可用性和实施​​:网站以PHP,R,MySQL和Nginx实施,可从http://rged.wall-eva.net免费获得。数据库URL:http://rged.wall-eva.net

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