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首页> 外文期刊>Journal of Clinical Microbiology >Serotypic differentiation of rotaviruses in field samples from diarrheic pigs by using nucleic acid probes specific for porcine VP4 and human and porcine VP7 genes.
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Serotypic differentiation of rotaviruses in field samples from diarrheic pigs by using nucleic acid probes specific for porcine VP4 and human and porcine VP7 genes.

机译:通过使用对猪VP4以及人和猪VP7基因具有特异性的核酸探针,在腹泻猪田间样品中轮状病毒的血清型分化。

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Of 216 fecal and intestinal samples collected from nursing or weaned diarrheic pigs in the United States and Canada, 57 were identified as group A rotavirus positive by RNA electrophoresis and silver staining. Fifty-seven and 52 rotavirus-positive samples were analyzed by hybridization with Gottfried and OSU PCR-derived gene 9 and 4 probes, respectively. Only 17 samples were identified with either homologous VP4 (P)- or VP7 (G)-coding genes or both. One rotavirus identified as G4 and P7 was similar to the previously characterized interserotype rotavirus, SB-1A. Additional hybridization analyses were performed with PCR-derived probes prepared from gene 9 cDNA of the human rotaviruses Wa (G1), DS-1 (G2), and P (G3) and of the porcine rotavirus YM (G11). Eleven of 52 samples collected and analyzed from swine in Ohio, California, and Nebraska were identified as G11. No samples with G1-, G2-, or G3-type specificities were detected among the 25 of 57 rotavirus-positive samples analyzed with human rotavirus-derived probes. Further investigations with a PCR-derived gene 4 probe prepared from porcine rotavirus YM revealed hybridization specificities similar to those of the OSU gene 4 probe.
机译:在美国和加拿大从哺乳或断奶的腹泻猪收集的216份粪便和肠样品中,有57份经RNA电泳和银染鉴定为A型轮状病毒阳性。通过分别与Gottfried和OSU PCR衍生的基因9和4探针杂交,分析了57个和52个轮状病毒阳性样品。仅鉴定了17个具有同源VP4(P)或VP7(G)编码基因或两者的样品。一种被标识为G4和P7的轮状病毒类似于先前鉴定的血清型轮状病毒SB-1A。使用由人轮状病毒Wa(G1),DS-1(G2)和P(G3)以及猪轮状病毒YM(G11)的基因9 cDNA制备的PCR衍生探针进行其他杂交分析。从俄亥俄州,加利福尼亚州和内布拉斯加州的猪收集并分析的52个样品中,有11个被标识为G11。在使用人类轮状病毒衍生的探针分析的57个轮状病毒阳性样本中,有25个没有检测到具有G1,G2或G3型特异性的样本。用猪轮状病毒YM制备的PCR衍生的基因4探针进行的进一步研究表明,杂交特异性与OSU基因4探针相似。

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