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首页> 外文期刊>Genomics >Whole mitochondrial genome of long-clawed mole vole (Prometheomys schaposchnikowi) from Turkey, with its phylogenetic relationships
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Whole mitochondrial genome of long-clawed mole vole (Prometheomys schaposchnikowi) from Turkey, with its phylogenetic relationships

机译：来自土耳其的长爪鼹鼠（Prometheomys Schaposchnowi）的整个线粒体基因组，其系统发育关系

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摘要

The mitogenome of Prometheomys schaposchnikowi was characterized for the first time as a circular DNA molecule (16.284?bp), containing 37 coding and 2 non-coding regions. In the mitogenome, ND6 and 8 tRNA genes were encoded on the light chain, while 12 PCGs, 14 tRNAs, 2 rRNAs, D-loop and OL were encoded on the heavy chain. The most common initiation codon in PCGs was ATG. As in many mammals, incomplete stop codons in P. schaposchnikowi were in the COX3, ND1 and ND4. Phylogenetic relationships were revealed using Bayesian method and the 13 PCGs. Seven genera (Arvicola, Dicrostonyx, Lasiopodomys, Myodes, Ondatra, Proedromys and Prometheomys) formed a monophyletic group, while Eothenomys, Microtus and Neodon were paraphyletic. P. schaposchnikowi constituted the most basal group within Arvicolinae. Divergence time estimation suggested that P. schaposchnikowi diversified during the Miocene (16.28 Mya). Further molecular studies are needed to test the distinctiveness and diversity of the genus Prometheomys.
机译：作为圆形DNA分子（16.284μlb）的第一次，含有37个编码和2个非编码区的促进剂的表征是普通丙虫草的催乳素。在促丝杆菌组中，在轻链上编码ND6和8个TRNA基因，而在重链上编码12pcg，14个TrNA，2 rRNA，D圈和OL。 PCG中最常见的发起密码子是ATG。与许多哺乳动物一样，P.Schaposchnikowi中的不完全止损密码子位于COX3，ND1和ND4中。使用贝叶斯方法和13个PCG揭示了系统发育关系。七属（Arvicola，Dicrostonyx，Lasiopodomys，Myodes，Ondatra，ProIDromys和Prometheomys）形成了单味群，而Eothenomys，Microotus和Neodon是对术的。 P. Schaposchnikowi构成了Arvicolinae最多的基础组织。发散时间估计表明，在中新世（16.28 mya）期间的P. Schaposchnikowi多样化。需要进一步的分子研究来测试Prometheomys属的独特性和多样性。

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