AN INTRODUCTION TO SOME NEW PAPERS ON PROTEIN COMPLEX PREDICTION, RNA BLOCK ALIGNMENT, DE NOVO PEPTIDE SEQUENCING, METAGENOMIC BINNING, AND OTHER RESULTS

Limsoon Wong

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AN INTRODUCTION TO SOME NEW PAPERS ON PROTEIN COMPLEX PREDICTION, RNA BLOCK ALIGNMENT, DE NOVO PEPTIDE SEQUENCING, METAGENOMIC BINNING, AND OTHER RESULTS

机译：关于蛋白质复合物预测，RNA区块比对，从头肽测序，代谢组学以及其他结果的一些新论文的介绍

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This issue of the Journal of Bioinformatics and Computational Biology presents newnresults and discussions of several problems in the analysis of data from biologicalnexperiments. The eight papers of this issue are briefly summarized below.nProtein interactions constitute a major aspect of all cellular processes. Consequently,nanalysis on the interactome is expected to produce several types ofnuseful information such as protein function,1 protein complexes,2,3 and functionalnmodules.4 In this issue, Sohaee and Forst5 describes a novel graph-theoretic clusteringnapproach to detect functional modules from the interactome. The approachnis based on the hypothesis that proteins within a complex should be within a shortnone to two hops from each other. This simple idea has achieved good recall andnprecision compared to existing methods.

机译：本期《生物信息学与计算生物学杂志》介绍了生物实验数据分析中的新成果和一些问题的讨论。该问题的八篇论文简要概述如下。n蛋白相互作用是所有细胞过程的主要方面。因此，对相互作用基因组的分析有望产生几种类型的有用信息，例如蛋白质功能，1蛋白复合物，2、3和功能模块。4。交互组。该方法基于这样的假设，即复合物中的蛋白质应在彼此短到两跳之间。与现有方法相比，这种简单的想法已实现了良好的召回率和精度。

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《Journal of Bioinformatics and Computational Biology》 |2010年第6期|p.1-3|共3页
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Limsoon Wong;
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1. An introduction to some new papers on protein complex prediction, RNA block alignment, de novo peptide sequencing, metagenomic binning, and other results [J] . Wong L. Journal of Bioinformatics and Computational Biology . 2010,第6期

机译：介绍一些有关蛋白质复合物预测，RNA区块比对，从头肽测序，宏基因组分箱和其他结果的新论文
2. Selective isolation of N-terminal peptides from proteins and their de novo sequencing by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry without regard to unblocking or blocking of N-terminal amino acids [J] . Yamaguchi M, Nakayama D, Shima K, Rapid Communications in Mass Spectrometry: RCM . 2008,第20期

机译：从基质中选择性分离N末端肽并通过基质辅助激光解吸/电离飞行时间质谱从头测序，而无需考虑N末端氨基酸的封闭或封闭
3. High-Throughput Identification of Proteins and Unanticipated Sequence Modifications Using a Mass-Based Alignment Algorithm for MS/MS de Novo Sequencing Results [J] . Brian C. Searle, Surendra Dasari, Mark Turner, Analytical chemistry . 2004,第8期

机译：使用基于质量的比对算法对MS / MS de Novo测序结果进行蛋白质的高通量鉴定和意料之外的序列修饰
4. Development of a universal method for selective isolation of N-terminal peptides from proteins and their de novo sequencing [C] . Daisuke Nakayama, Minoru Yamaguchi, Hiroki Kuyama, ASMS Conference on Mass Spectrometry and Allied Topics . 2007

机译：一种普遍方法的开发，用于选择性分离蛋白质的N-末端肽及其DE Novo测序
5. De novo peptide sequencing of spider silk proteins by mass spectrometry and discovery of novel fibroin genes [D] . Hu, Xiaoyi 2004

机译：质谱从头对蜘蛛丝蛋白进行从头测序并发现新的丝蛋白基因
6. A De novo Peptide from a High Throughput Peptide Library Blocks Myosin A -MTIP Complex Formation in [O] . Zill e Anam, Nishant Joshi, Sakshi Gupta, 2020

机译：来自高通量肽库的德诺肽阻断肌蛋白A-MTIP复合物形成
7. AN INTRODUCTION TO SOME NEW PAPERS ON PROTEIN COMPLEX PREDICTION, RNA BLOCK ALIGNMENT, DE NOVO PEPTIDE SEQUENCING, METAGENOMIC BINNING, AND OTHER RESULTS [O] . 2010

机译：对蛋白质复杂预测，RNA阻滞比对，DE Novo肽测序，偏蛋白烧结等结果的介绍

AN INTRODUCTION TO SOME NEW PAPERS ON PROTEIN COMPLEX PREDICTION, RNA BLOCK ALIGNMENT, DE NOVO PEPTIDE SEQUENCING, METAGENOMIC BINNING, AND OTHER RESULTS

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