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Performance of SW-ARQ in bacterial quorum communications

机译:SW-ARQ在细菌群体通信中的性能

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Bacteria communicate with one another by exchanging specific chemical signals called autoinducers. This process, also called quorum sensing, enables a cluster of bacteria to regulate their gene expression and behaviour collectively and synchronously, such as bioluminescence, virulence, sporulation and conjugation. Bacteria assess their population density by detecting the concentration of autoinducers. In Vibrio fischeri, which is a heterotrophic Gram-negative marine bacterium, quorum sensing relies on the synthesis, accumulation and subsequent sensing of a signalling molecule (3-oxo-C6-HSL, an N-acyl homoserine lactone or AHL). In this work, a data link layer protocol for a bacterial communication paradigm based on diffusion is introduced, considering two populations of bacteria as the transmitter node and the receiver node, instead of employing two individual bacteria. Moreover, some initial results are provided, which concern the application of the Stop-N-Wait Automatic Repeat reQuest (SW-ARQ.) schemes to the proposed model. The performances of the system are later evaluated, in terms of the transmission time, frame error rate, energy consumption and transmission efficiency.
机译:细菌通过交换称为自动诱导剂的特定化学信号相互交流。此过程也称为群体感应,使一簇细菌能够集体且同步地调节其基因表达和行为,例如生物发光,毒力,孢子形成和结合。细菌通过检测自身诱导物的浓度来评估其种群密度。在异养革兰氏阴性海洋细菌费氏弧菌中,群体感应依赖于信号分子(3-氧代-C6-HSL,N-酰基高丝氨酸内酯或AHL)的合成,积累和随后的感应。在这项工作中,引入了一种基于扩散的细菌通信范例的数据链路层协议,该方法将两个细菌种群作为发送者节点和接收者节点,而不是使用两个单独的细菌。此外,提供了一些初始结果,这些结果涉及将Stop-N-Wait自动重复请求(SW-ARQ。)方案应用于所提出的模型。随后,根据传输时间,帧错误率,能耗和传输效率评估系统的性能。

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