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A Survey of Cloud-Based Service Computing Solutions for Mammalian Genomics

机译:哺乳动物基因组学基于云的服务计算解决方案的调查

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摘要

Cloud-based service computing has started to change the way how research in science, in particular biology, medicine, and engineering, is being carried out. Researchers in the area of mammalian genomics have taken advantage of cloud computing technology to cost-effectively process large amounts of data and speed up discovery. Mammalian genomics is limited by the cost and complexity of analysis, which require large amounts of computational resources to analyse huge amount of data and biology specialists to interpret results. On the other hand the application of this technology requires computing knowledge, in particular programming and operations management skills to develop high performance computing (HPC) applications and deploy them on HPC clouds. We carried out a survey of cloud-based service computing solutions, as the most recent and promising instantiations of distributed computing systems, in the context their use in research of mammalian genomic analysis. We describe our most recent research and development effort which focuses on building Software as a Service (SaaS) clouds to simplify the use of HPC clouds for carrying out mammalian genomic analysis.
机译:基于云的服务计算已开始改变科学研究方法的实施方式,尤其是生物学,医学和工程学。哺乳动物基因组学领域的研究人员已经利用云计算技术来经济高效地处理大量数据并加快发现速度。哺乳动物基因组学受限于分析的成本和复杂性,这需要大量的计算资源来分析大量的数据,并且需要生物学专家来解释结果。另一方面,此技术的应用需要计算知识,尤其是编程和操作管理技能,才能开发高性能计算(HPC)应用程序并将其部署在HPC云上。我们对基于云的服务计算解决方案进行了一次调查,这是分布式计算系统的最新实例,在它们用于哺乳动物基因组分析研究的背景下。我们描述了我们最近的研发工作,重点是构建软件即服务(SaaS)云,以简化HPC云用于进行哺乳动物基因组分析的过程。

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