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Describing commonalities in microbial effector delivery using the Gene Ontology

机译:使用基因本体论描述微生物效应器递送的共性

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Myriad symbiotic microbes, ranging from mutualistic through to pathogenic, deliver 'effector' molecules into the cytoplasm or cellular milieu of their hosts to facilitate colonization. Among ecologically and evolutionarily diverse taxa, analogous processes and structures exist to facilitate effector delivery. These include syringe-like injection (bacteria and nematodes), common host-targeting signals (oomycetes and protozoans) and specialized intercellular structures (fungi and oomycetes). Here, we briefly introduce readers to the Gene Ontology (GO), a controlled vocabulary to facilitate comparative genomics of diverse taxa. We also summarize and compare selected mechanisms of effector delivery from various organisms and show how careful annotation of gene products with GO can reveal underlying similarities among diverse taxa.
机译:从互利共生到致病性,无数种共生微生物将“效应子”分子传递到宿主的细胞质或细胞环境中,以促进定殖。在生态和进化上多样化的分类单元中,存在相似的过程和结构以促进效应子的传递。这些包括注射器样注射(细菌和线虫),常见的宿主靶向信号(卵菌和原生动物)和特殊的细胞间结构(真菌和卵菌)。在这里,我们向读者简要介绍基因本体论(GO),这是一种受控词汇表,可促进各种分类单元的比较基因组学。我们还总结并比较了从各种生物体中选择的效应子传递机制,并显示了用GO仔细注解基因产物如何揭示不同类群之间的潜在相似性。

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