The effect of DNA phase structure on DNA walks

S. Cebrat; M. R. Dudek

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The effect of DNA phase structure on DNA walks

机译：DNA相结构对DNA游走的影响

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We have performed several kinds of DNA walks which often are the first steps for further analysis of DNA structure and log range correlations. The DNA walks analysing frequency of G + C versus A + T cannot indicated the coding strand while purine versus pyrimidine DNA walks or two-dimensional (A - T, G - C) DNA walks in some instances can indicate the coding strand but cannot resolve the coding frame. The modified two-dimensional (A - T, G - C) DNA walks respecting the three-nucleotide codon structure show very high correlation in nucleotide composition of DNA coding sequences. They can distinguish between coding and non-coding sequences and indicate the strand and the phase in which DNA is coding.

机译：我们已经进行了几种DNA步移，这通常是进一步分析DNA结构和对数范围相关性的第一步。分析G + C与A + T频率的DNA步幅不能显示编码链，而嘌呤与嘧啶DNA步幅或二维（A-T，G-C）DNA步幅分析在某些情况下可以指示编码链，但无法解析编码帧。修饰的二维（A-T，G-C）DNA序列遵循三核苷酸密码子结构，在DNA编码序列的核苷酸组成中显示出非常高的相关性。它们可以区分编码序列和非编码序列，并指示DNA编码的链和相。

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《Zeitschrift fur Physik, B. Condensed Matter》 |1998年第2期|共6页
作者
S. Cebrat; M. R. Dudek;
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正文语种 eng
中图分类物理学;
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02.50.Fz stochastic analysis; 42.62.Be biological and medical applications; 02.70.Rw other computational methods;

机译：02.50.Fz随机分析;42.62.Be生物和医学应用;02.70.Rw其他计算方法;

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1. The effect of DNA phase structure on DNA walks [J] . S. Cebrat, M. R. Dudek Zeitschrift fur Physik, B. Condensed Matter . 1998,第2期

机译：DNA相结构对DNA游走的影响
2. Is the formation of cationic lipid-DNA complexes a thermodynamically driven phenomenon? Structure and phase behavior of DC-Choi/DNA complexes say not [J] . Giulio Caracciolo, Daniela Pozzi, Ruggero Caminiti Applied Physics Letters . 2006,第4期

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3. Effects of cationic charge on three-dimensional structures of intercalative complexes: structure of a bis-intercalated DNA complex solved by MAD phasing. [J] . Shui X, Peek ME, Lipscomb LA, Current medicinal chemistry . 2000,第1期

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4. SOLUTION AND GAS-PHASE STRUCTURES OF DNA G-QUADRUPLEXES: ION MOBILITY MASS SPECTROMETRY, SOLUTION SPECTROSCOPY, AND COLLISION CROSS SECTION CALCULATIONS [C] . Anirban Ghosh, Frederic Rosu, Valerie Gabelica International Mass Spectrometry Conference . 2018

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5. Part I: Radical cation propagation through bulged and mis-paired DNA: "A purine:purine staggered walk". Part II: Bulged DNA cleavage via a "classic intercalator": A surprising role for singlet-excited ethidium bromide in the selective cleavage of a G-bulge containing duplex. Part III: Synthesis and photochemical behavior of peptide nucleic acid trimers containing benzamidonaphthalimide. [D] . Boone, Edna Karen. 2001

机译：第一部分：通过凸起和错误配对的DNA进行的自由基阳离子传播：“嘌呤：嘌呤错开行走”。第二部分：通过“经典嵌入剂”进行的DNA裂解：单线态激发的溴化乙锭在选择性裂解含G-双链的双链体中的出奇作用。第三部分：含有苯甲酰胺基萘二甲酰亚胺的肽核酸三聚体的合成和光化学行为。
6. Chromatin structure of the Saccharomyces cerevisiae DNA topoisomerase I promoter in different growth phases. [O] . L Rubbi, G Camilloni, M Caserta, 1997

机译：啤酒酵母DNA拓扑异构酶I启动子在不同生长阶段的染色质结构。
7. Transition topology of gene structure – a generalised DNA model with dual role in DNA phase transition [O] . R. Lalwani, S. Chakraborty, A. Bannerjee 1987

机译：基因结构的过渡拓扑 - 一种具有双重作用的广义DNA模型在DNA相变

The effect of DNA phase structure on DNA walks

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