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首页> 外文期刊>Journal de Chimie Physique et de Physico-Chimie Biologique >An approximate procedure for the calculation of van der Waals and solvent-accessible surfaces areas; computing Gibbs free energies of hydration
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An approximate procedure for the calculation of van der Waals and solvent-accessible surfaces areas; computing Gibbs free energies of hydration

机译:计算范德华力和溶剂可及表面积的近似程序;计算水化的吉布斯自由能

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摘要

Both geometrical and analytical steps of the new ASC procedure for the approximate computation of molecular van der Waals and solvent-accessible surface areas, were calibrated. The assigned objective was to determine best fit accurate surface values for a representative set of molecular structures. Molecular surfaces, partial atomic surfaces, as also the gradients describing surface changes as a function of atomic displacements are analytically described. After the validation of the ASC model, an endeavour was made to correlate experimental Gibbs free energies of hydration with partial atomic surfaces. A satisfactory correlation was obtained for a large set of organic compounds, provided that #sigma# and #pi# surface elements are introduced in addition to the traditional differentiation into polar and non-polar partial atomic surfaces.
机译:校准了用于近似计算分子范德华力和溶剂可及表面积的新ASC程序的几何步骤和分析步骤。分配的目标是确定一组代表性分子结构的最佳拟合精确表面值。分析性地描述了分子表面,部分原子表面以及描述表面变化作为原子位移函数的梯度。在验证了ASC模型之后,我们努力将水化实验的吉布斯自由能与部分原子表面相关联。如果除了传统的区分极性和非极性部分原子表面之外还引入了#sigma#和#pi#表面元素,就可以获得大量有机化合物的令人满意的相关性。

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