Family fingerprints: A global approach to structural classification

Casagrande A.; Fabris F.

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Family fingerprints: A global approach to structural classification

机译：家庭指纹：结构分类的全球方法

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Protein domain classification is a useful tool to deduce functional properties of proteins. Many software to classify domains according to available databases have been proposed so far. This paper introduces the notion of "fingerprint" as an easy and readable digest of the similarities between a protein fragment and an entire set of sequences. This concept offers us a rationale for building an automatic SCOP classifier which assigns a query sequence to the most likely family. Fingerprint-based analysis has been implemented in a software tool and we report some experimental validations for it.

机译：蛋白质结构域分类是推断蛋白质功能特性的有用工具。到目前为止，已经提出了许多根据可用数据库对域进行分类的软件。本文介绍“指纹”的概念，将其作为蛋白质片段和整个序列之间相似性的简单易读摘要。该概念为我们提供了构建自动SCOP分类器的原理，该分类器将查询序列分配给最可能的族。基于指纹的分析已在软件工具中实现，我们对此进行了一些实验验证。

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《Journal of Bioinformatics and Computational Biology》 |2012年第3期|共16页
作者
Casagrande A.; Fabris F.;
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正文语种 eng
中图分类细胞生物学;
关键词
BLOSUM spectrum; Protein domains; SCOP classification;

机译：BLOSUM光谱;蛋白质结构域;SCOP分类;

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1. Family fingerprints: A global approach to structural classification [J] . Casagrande A., Fabris F. Journal of Bioinformatics and Computational Biology . 2012,第3期

机译：家庭指纹：结构分类的全球方法
2. FAMILY FINGERPRINTS: A GLOBAL APPROACH TO STRUCTURAL CLASSIFICATION [J] . ALBERTO CASAGRANDE* and FRANCESCO FABRIS Journal of Bioinformatics and Computational Biology . 2012,第3期

机译：家庭指纹：结构分类的全球方法
3. Fingerprints classification using artificial neural networks: a combined structural and statistical approach. [J] . Nagaty KA Neural Networks: The Official Journal of the International Neural Network Society . 2001,第9期

机译：使用人工神经网络进行指纹分类：结构和统计相结合的方法。
4. SCOP family fingerprints: An information theoretic approach to structural classification of protein domains [C] . Casagrande Alberto, Fabris Francesco 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops . 2011

机译：SCOP家族指纹：蛋白质结构域结构分类的信息理论方法
5. Classification of fingerprints using directional images with an adaptive approach to detect the singular points. [D] . Mukkavilli, Sangeetha. 2005

机译：使用定向图像和自适应方法对指纹进行分类，以检测奇异点。
6. Self Organizing Map-Based Classification of Cathepsin k and S Inhibitors with Different Selectivity Profiles Using Different Structural Molecular Fingerprints: Design and Application for Discovery of Novel Hits [O] . Saleh K. Ihmaid, Hany E. A. Ahmed, Mohamed F. Zayed, 2016

机译：基于自组织图的组织蛋白酶k和S抑制剂具有不同选择性的使用不同结构分子指纹的分类：设计和应用发现新的命中。
7. Self Organizing Map-Based Classification of Cathepsin k and S Inhibitors with Different Selectivity Profiles Using Different Structural Molecular Fingerprints: Design and Application for Discovery of Novel Hits [O] . Saleh K. Ihmaid, Hany E. A. Ahmed, Mohamed F. Zayed, 2016

机译：使用不同结构分子指纹自组织基于地图的具有不同选择性分布的组织蛋白酶k和s抑制剂的分类：用于发现新命中的设计和应用
8. Global Function Approach in Structural Analysis: Basic Approach, Numerical Results [R] . Almroth, B. O., Stehling, P., Brogan, F. A. 1981

机译：结构分析中的全局函数方法：基本方法，数值结果

Family fingerprints: A global approach to structural classification

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