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Evidence for DNA bending at the T7 RNA polymerase promoter.

机译:T7 RNA聚合酶启动子发生DNA弯曲的证据。

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Phage T7 RNA polymerase is the only DNA-dependent RNA polymerase for which we have a high-resolution structure of the promoter-bound complex. Recent studies with the more complex RNA polymerases have suggested a role for DNA wrapping in the initiation of transcription. Here, circular permutation gel retardation assays provide evidence that the polymerase does indeed bend its promoter DNA. A complementary set of experiments employing differential phasing from an array of phased A-tracts provides further evidence for both intrinsic and polymerase-induced bends in the T7 RNA polymerase promoter DNA. The bend in the complex is predicted to be about 40-60 degrees and to be centered around positions -2 to +1, at the start site for transcription, while the intrinsic bend is much smaller (about 10 degrees ). These results, viewed in the light of a recent crystal structure for the complex, suggest a mechanism by which binding leads directly to bending. Bending at the start site would then facilitate the melting necessary to initiate transcription. Copyright 2000 Academic Press.
机译:噬菌体T7 RNA聚合酶是唯一的DNA依赖的RNA聚合酶,对于它,我们具有与启动子结合的复合物的高分辨率结构。最近对更复杂的RNA聚合酶的研究表明,DNA包裹在转录起始过程中发挥了作用。在此,圆形置换凝胶阻滞测定法提供了证据,证明聚合酶确实弯曲了其启动子DNA。一组互补的实验采用了一系列相控A道的差分相位,为T7 RNA聚合酶启动子DNA的固有弯曲和聚合酶诱导的弯曲提供了进一步的证据。预测复合物中的弯曲大约为40-60度,并在转录的起始位点以-2至+1位置为中心,而固有弯曲要小得多(大约10度)。从该配合物的最新晶体结构来看,这些结果表明了结合直接导致弯曲的机理。然后在起始位点弯曲将促进启动转录所必需的融解。版权所有2000学术出版社。

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