首页> 外文期刊>The journal of physical chemistry, A. Molecules, spectroscopy, kinetics, environment, & general theory >Incorporation of Inhomogeneous Ion Diffusion Coefficients into Kinetic Lattice Grand Canonical Monte Carlo Simulations and Application to Ion Current Calculations in a Simple Model Ion Channel
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Incorporation of Inhomogeneous Ion Diffusion Coefficients into Kinetic Lattice Grand Canonical Monte Carlo Simulations and Application to Ion Current Calculations in a Simple Model Ion Channel

机译:非均质离子扩散系数纳入动力学格子大正则蒙特卡罗模拟及其在简单模型离子通道中的离子电流计算中的应用

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摘要

To deal with inhomogeneous diffusion coefficients of ions without altering the lattice spacing in the kinetic lattice grand canonical Monte Carlo(KLGCMC)simulation,an algorithm that incorporates diffusion coefficient variation into move probabilities is proposed and implemented into KLGCMC calculations.Using this algorithm,the KLGCMC simulation method is applied to the calculation of ion currents in a simple model ion channel system.Comparisons of ion currents and ion concentrations from these simulations with Poisson-Nernst-Planck(PNP)results show good agreement between the two methods for parameters where the latter method is expected to be accurate.
机译:为了解决离子的不均匀扩散系数而不改变动力学晶格大正则蒙特卡洛(KLGCMC)模拟中的晶格间距,提出了一种将扩散系数变化纳入移动概率的算法,并将其实现到KLGCMC计算中。使用该算法,KLGCMC模拟方法被用于简单模型离子通道系统中的离子流的计算,通过与Poisson-Nernst-Planck(PNP)结果进行的这些模拟的离子流和离子浓度的比较表明两种方法之间的参数具有很好的一致性,而后者该方法应该是准确的。

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