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Architecture of the Tn7 posttransposition complex: an elaborate nucleoprotein structure.

机译:Tn7易位复合物的体系结构:复杂的核蛋白结构。

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Four transposition proteins encoded by the bacterial transposon Tn7, TnsA, TnsB, TnsC, and TnsD, mediate its site- and orientation-specific insertion into the chromosomal site attTn7. To establish which Tns proteins are actually present in the transpososome that executes DNA breakage and joining, we have determined the proteins present in the nucleoprotein product of transposition, the posttransposition complex (PTC), using fluorescently labeled Tns proteins. All four required Tns proteins are present in the PTC in which we also find that the Tn7 ends are paired by protein-protein contacts between Tns proteins bound to the ends. Quantification of the relative amounts of the fluorescent Tns proteins in the PTC indicates that oligomers of TnsA, TnsB, and TnsC mediate Tn7 transposition. High-resolution DNA footprinting of the DNA product of transposition attTn7Colon, two colonsTn7 revealed that about 350 bp of DNA on the transposon ends and on attTn7 contact the Tns proteins. All seven binding sites for TnsB, the component of the transposase that specifically binds the ends and mediates 3' end breakage and joining, are occupied in the PTC. However, the protection pattern of the sites closest to the Tn7 ends in the PTC are different from that observed with TnsB alone, likely reflecting the pairing of the ends and their interaction with the target nucleoprotein complex necessary for activation of the breakage and joining steps. We also observe extensive protection of the attTn7 sequences in the PTC and that alternative DNA structures in substrate attTn7 that are imposed by TnsD are maintained in the PTC.
机译:细菌转座子Tn7,TnsA,TnsB,TnsC和TnsD编码的四种转座蛋白介导其位点和方向特异性插入染色体位点attTn7。为了确定哪些Tns蛋白实际上存在于执行DNA断裂和连接的转座体中,我们已经使用荧光标记的Tns蛋白确定了转座核蛋白产物(转座后复合体(PTC))中存在的蛋白。所有四个所需的Tns蛋白都存在于PTC中,我们还发现Tn7末端由结合到末端的Tns蛋白质之间的蛋白质-蛋白质接触配对。量化PTC中荧光Tns蛋白的相对量表明TnsA,TnsB和TnsC的寡聚体介导Tn7转座。转座attTn7Colon的DNA产物(两个结肠Tn7)的高分辨率DNA足迹显示,转座子末端和attTn7上约350 bp的DNA与Tns蛋白接触。 TnsB(转座酶的特异性结合末端并介导3'末端断裂和连接)的所有七个结合位点均被PTC占据。但是,PTC中最接近Tn7末端的位点的保护模式与单独使用TnsB观察到的保护模式不同,这可能反映了末端的配对以及它们与激活断裂和连接步骤所必需的目标核蛋白复合物的相互作用。我们还观察到了PTC中attTn7序列的广泛保护,并且在PTC中保留了由TnsD施加的底物attTn7中的其他DNA结构。

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