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A comprehensive assessment of long intrinsic protein disorder from the DisProt database

机译:解压缩数据库中长内在蛋白质障碍的全面评估

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Motivation: Intrinsic disorder (ID), i.e. the lack of a unique folded conformation at physiological conditions, is a common feature for many proteins, which requires specialized biochemical experiments that are not high-throughput. Missing X-ray residues from the PDB have been widely used as a proxy for ID when developing computational methods. This may lead to a systematic bias, where predictors deviate from biologically relevant ID. Large benchmarking sets on experimentally validated ID are scarce. Recently, the DisProt database has been renewed and expanded to include manually curated ID annotations for several hundred new proteins. This provides a large benchmark set which has not yet been used for training ID predictors.
机译:动机:内在疾病(ID),即在生理条件下缺乏独特的折叠构象,是许多蛋白质的常见特征,这需要专门的生物化学实验,这些实验不是高通量。 从PDB缺少缺失的X射线残留量在开发计算方法时已被广泛用作ID的代理。 这可能导致系统偏差,其中预测器偏离生物相关的ID。 实验验证ID上的大型基准套装是稀缺的。 最近,DISprot数据库已经续订和扩展,以包括几百个新蛋白的手动策划ID注释。 这提供了一个大型基准集合,尚未用于培训ID预测器。

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