T-BAS: Tree-Based Alignment Selector toolkit for phylogenetic-based placement, alignment downloads and metadata visualization: an example with the Pezizomycotina tree of life

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T-BAS: Tree-Based Alignment Selector toolkit for phylogenetic-based placement, alignment downloads and metadata visualization: an example with the Pezizomycotina tree of life

机译：T-BAS：基于树的对齐选择器工具包，用于系统发育的展示位置，对准下载和元数据可视化：具有培养Zizomycotina生活树的示例

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Motivation: High-quality phylogenetic placement of sequence data has the potential to greatly accelerate studies of the diversity, systematics, ecology and functional biology of diverse groups. We developed the Tree-Based Alignment Selector (T-BAS) toolkit to allow evolutionary placement and visualization of diverse DNA sequences representing unknown taxa within a robust phylogenetic context, and to permit the downloading of highly curated, single- and multi-locus alignments for specific clades.

机译：动机：序列数据的高质量系统发育放置有可能大大加速多样性，系统性，生态和功能生物学的研究。我们开发了基于树的对齐选择器（T-BAS）工具包，以允许在强大的系统发育背景下代表未知分类量的不同DNA序列的进化放置和可视化，并允许下载高度策划，单轨和多基因座对齐具体的碎片。

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《Bioinformatics》 |2017年第8期|共9页
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正文语种 eng
中图分类生物工程学（生物技术）;
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1. T-BAS: Tree-Based Alignment Selector toolkit for phylogenetic-based placement, alignment downloads and metadata visualization: an example with the Pezizomycotina tree of life [J] . Bioinformatics . 2017,第8期

机译：T-BAS：基于树的对齐选择器工具包，用于系统发育的展示位置，对准下载和元数据可视化：具有培养Zizomycotina生活树的示例
2. MISTICA: Minimum Spanning Tree-Based Coarse Image Alignment for Microscopy Image Sequences [J] . Nilanjan Ray, Sara McArdle, Klaus Ley, Biomedical and Health Informatics, IEEE Journal of . 2016,第6期

机译：MISTICA：显微镜图像序列的基于最小生成树的粗图像对齐
3. A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences [J] . Claudia Chica, Alberto Labarga, Cathryn M Gould, BMC Bioinformatics . 2008,第1期

机译：一种基于树的蛋白质序列多重比对中短线性基序的保守性评分方法
4. Seeding Statistical Machine Translation with Translation Memory Output through Tree-Based Structural Alignment [C] . Ventsislav Zhechev, Josef van Genabith 23rd International conference on computational linguistics, Proceedings of the 2nd workshop on the people's web meets NLP:collaboratively constructed semantic resources. . 2010

机译：种子统计机器翻译，通过基于树的结构对齐输出翻译记忆
5. T-BAS Version 2.1: Tree-Based Alignment Selector Toolkit for Evolutionary Placement of DNA Sequences and Viewing Alignments and Specimen Metadata on Curated and Custom Trees [O] . Ignazio Carbone, James B. White, Jolanta Miadlikowska, 2019

机译：T-BAS版本2.1：基于树的比对选择器工具包用于DNA序列的进化放置以及在定制和定制树上查看比对和标本元数据
6. T-BAS: Tree-Based Alignment Selector toolkit for phylogenetic-based placement, alignment downloads and metadata visualization: an example with the Pezizomycotina tree of life [O] . Ignazio Carbone, James B. White, Jolanta Miadlikowska, 2016

机译：T-BAS：基于树的对齐选择器工具包，用于系统发育的展示位置，对准下载和元数据可视化：具有培养Zizomycotina生活树的示例

T-BAS: Tree-Based Alignment Selector toolkit for phylogenetic-based placement, alignment downloads and metadata visualization: an example with the Pezizomycotina tree of life

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