【24h】

The GWIPS-viz Browser

机译:Gwips-viz浏览器

获取原文
获取原文并翻译 | 示例
       

摘要

GWIPS-viz is a publicly available browser that provides Genome Wide Informationon Protein Synthesis through the visualization of ribosome profilingdata. Ribosome profiling (Ribo-seq) is a high-throughput technique which isolatesfragments of messenger RNA that are protected by the ribosome. Thealignment of the ribosome-protected fragments or footprint sequences to thecorresponding reference genome and their visualization using GWIPS-viz allowsfor unique insights into the genome loci that are expressed as potentiallytranslated RNA. The GWIPS-viz browser hosts both Ribo-seq data andcorresponding mRNA-seq data from publicly available studies across a numberof genomes, avoiding the need for computational processing on the userside. Since its initial publication in 2014, over 1885 tracks have been producedacross 24 genomes. This unit describes the navigation of the GWIPS-vizgenome browser, the uploading of custom tracks, and the downloading of theRibo-seq/mRNA-seq alignment data.
机译:Gwips-viz是一种公开的浏览器,通过核糖体Profiledata的可视化提供基因组宽的信息蛋白合成。 核糖体分析(Ribo-SEQ)是一种高通量技术,其分离由核糖体保护的信使RNA的分离物。 将核糖体保护的片段或足迹序列的核心与对应的参考基因组的占点序列和使用GWIPS-viz的可视化允许独特的见解,以表达为潜在转移的RNA的基因组基因座。 Gwips-viz浏览器将Ribo-SEQ数据寄存在跨越Genomes的公开可用研究中的MRNA-SEQ数据,避免了对用户的计算处理。 自2014年初始出版以来,超过1885年的曲目已经产生了24个基因组。 本机描述了GWIPS-VIZGenome浏览器的导航,自定义轨道的上载,以及下载到Theribo-SEQ / MRNA-SEQ对齐数据。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号