Complete genomic sequence of bacteriophage J2-1: A novel Pseudoalteromonas phenolica phage isolated from the coastal water of Qingdao, China

Liu Qian; Han Yuye; Wang Dongxu; Wang Qi; Liu Xinxin; Li Yan; Song Xue; Wang Min; Jiang Yong; Meng Zhexuan; Shao Hongbing; McMinn Andrew

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Complete genomic sequence of bacteriophage J2-1: A novel Pseudoalteromonas phenolica phage isolated from the coastal water of Qingdao, China

机译：完全基因组序列的噬菌体J2-1：中国青岛沿海水分中分离的新型假亚洛尼诺酚噬菌体

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Phage J2-1 was isolated from surface coastal seawater off Qingdao, China in July 2015. It is the first time that a phage active against Pseudoalteromonas phenolica CECT 7645(T) has been isolated. Morphological analysis using transmission electron microscopy revealed that phage J2-1 has an 87 +/- 3 nm head, a 111 +/- 3 nm long tail and appears to belong to the family Myoviridae. Genomic analysis of J2-1 revealed a genome size of 142,204 bp with 37.92% G + C content and 180 ORFs. Overall the ORF sequences accounted for 89% of the genome sequence. A genome comparison using the BLASTN tool in the NCBI database found no obvious similarity between J2-1 and other known phages.

机译：噬菌体J2-1于2015年7月，中国青岛沿海沿海海水中分离出来。这是第一次患有针对假亚甲酰酚酚酚类CECT 7645（T）的噬菌体。使用透射电子显微镜的形态学分析显示噬菌体J2-1具有87 +/- 3nm头，111 +/- 3nm长的尾部，似乎属于Myoviridae的家族。 J2-1的基因组分析显示了142,204bp的基因组大小，具有37.92％G + C含量和180态ORF。总体而言，ORF序列占基因组序列的89％。使用NCBI数据库中使用BLASTN工具的基因组比较在J2-1和其他已知噬菌体之间没有发现明显的相似性。

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来源
《Marine genomics》 |2018年第2018期|共4页
作者
Liu Qian; Han Yuye; Wang Dongxu; Wang Qi; Liu Xinxin; Li Yan; Song Xue; Wang Min; Jiang Yong; Meng Zhexuan; Shao Hongbing; McMinn Andrew;
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作者单位

Ocean Univ China Coll Marine Life Sci Qingdao 266003 Peoples R China;

Ocean Univ China Coll Marine Life Sci Qingdao 266003 Peoples R China;

Ocean Univ China Coll Marine Life Sci Qingdao 266003 Peoples R China;

Ocean Univ China Coll Marine Life Sci Qingdao 266003 Peoples R China;

Ocean Univ China Coll Marine Life Sci Qingdao 266003 Peoples R China;

Ocean Univ China Coll Marine Life Sci Qingdao 266003 Peoples R China;

Ocean Univ China Coll Marine Life Sci Qingdao 266003 Peoples R China;

Ocean Univ China Coll Marine Life Sci Qingdao 266003 Peoples R China;

Ocean Univ China Coll Marine Life Sci Qingdao 266003 Peoples R China;

39 Middle Sch Qingdao Qingdao 266003 Peoples R China;

Ocean Univ China Coll Marine Life Sci Qingdao 266003 Peoples R China;

Univ Tasmania Inst Marine &

Antarctic Studies Hobart Tas Australia;

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原文格式 PDF
正文语种 eng
中图分类遗传学;
关键词
Bacteriophage; Pseudoalteromonas; Myoviridae; Complete genome;

机译：噬菌体;伪甲腺炎;myoviridae;完全基因组;

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专利

1. Complete genomic sequence of bacteriophage J2-1: A novel Pseudoalteromonas phenolica phage isolated from the coastal water of Qingdao, China [J] . Liu Qian, Han Yuye, Wang Dongxu, Marine genomics . 2018,第期

机译：完全基因组序列的噬菌体J2-1：中国青岛沿海水分中分离的新型假亚洛尼诺酚噬菌体
2. Complete Genomic Sequence of Bacteriophage H188: A Novel Vibrio kanaloae Phage Isolated from Yellow Sea [J] . Li Yan, Wang Min, Liu Qian, Current Microbiology: An International Journal . 2016,第5期

机译：噬菌体H188的完整基因组序列：一种从黄海分离的新型卡那氏弧菌噬菌体
3. Isolation and Complete Genome of the Marine Pseudoalteromonas Phage C7 from Coastal Seawater of Yellow Sea, China [J] . Current Microbiology: An International Journal . 2020,第2期

机译：中国黄海沿海海水海洋假海洋山脉噬菌体C7的分离与完整基因组
4. Coastal Lowlands' Inundation Risk Assessment with High-resolution TanDEM-X DEM in Qingdao Coastal Plains, China [C] . Peng Li, Miao Li, Zhenhong Li, International Symposium on Land Subsidence . 2021

机译：沿海低地的淹没风险评估与中国青岛沿海平原的高分辨率TANDEM-X DEM
5. Finding a novel way for fast sequence alignment and exploiting information theory in bacterial genomes and complete phages. [D] . Akhter, Sajia. 2013

机译：寻找一种快速的序列比对的新方法，并利用细菌基因组和完整噬菌体中的信息论。
6. Complete Genome Sequence of a Quorum-Sensing Bacterium Oceanicola sp. Strain D3 Isolated from a Microplastic Surface in Coastal Water of Qingdao China [O] . Qian Li, Xiyuan Xu, Changfei He, 2019

机译：群体感应细菌Oceanicola sp。的完整基因组序列。 D3菌株从青岛沿海水中的微塑料表面分离出来
7. Complete Genomic Sequence of Bacteriophage ul36: Demonstration of Phage Heterogeneity within the P335 Quasi-Species of Lactococcal Phages [O] . Labrie Steve, Moineau Sylvain 2002

机译：噬菌体ul36的完整基因组序列：乳球菌噬菌体P335准种内噬菌体异质性的证明。

Complete genomic sequence of bacteriophage J2-1: A novel Pseudoalteromonas phenolica phage isolated from the coastal water of Qingdao, China

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