...
首页> 外文期刊>Journal of Bioinformatics and Computational Biology >Exploring the potential microRNA sponge interactions of breast cancer based on some known interactions
【24h】

Exploring the potential microRNA sponge interactions of breast cancer based on some known interactions

机译:基于一些已知的相互作用,探索乳腺癌的潜在microRNA海绵相互作用

获取原文
获取原文并翻译 | 示例
           

摘要

MicroRNA (miRNA) sponges' regulatory mechanisms play an important role in developing human cancer. Herein, we develop a new method to explore potential miRNA sponge interactions (EPMSIs) for breast cancer. Based on some known interactions, and a matching gene expression profile, EPMSIs explored other potential miRNA sponge interactions for breast cancer. Every interaction is inferred with a value representing interaction intensity. Then, we apply a clustering algorithm called BCPlaid to potential interactions. Ten modules are identified; nine of them are closely associated with biological enrichments. When we employ a classification algorithm to separate normal and tumor samples in each module, each module demonstrates powerful classification performance. Furthermore, EPMSI illustrates a new method to explore the miRNA sponge regulatory network for breast cancer by applying its superior performance.
机译:MicroRNA(miRNA)海绵的监管机制在发展人类癌症方面发挥着重要作用。 在此,我们开发了一种探讨潜在的miRNA海绵相互作用(EPMS)用于乳腺癌的新方法。 基于一些已知的相互作用和匹配基因表达谱,EPMSIS探讨了乳腺癌的其他潜在的miRNA海绵相互作用。 通过表示交互强度的值推断出每个交互。 然后,我们将名为BCPlAID的聚类算法应用于潜在的交互。 识别十个模块; 其中九个与生物富集密切相关。 当我们使用分类算法在每个模块中分离正常和肿瘤样本时,每个模块都展示了强大的分类性能。 此外,EPMSI说明了通过应用其优异的性能来探索MiRNA海绵调节网络的新方法。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号