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Methylthioadenosine deaminase in an alternative quorum sensing pathway in Pseudomonas aeruginosa

机译:甲基噻吩诺酸肽在假单胞菌铜绿假单胞菌的替代法定传感途径中

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摘要

Pseudomonas aeruginosa possesses an unusual pathway for 5′-methylthioadenosine (MTA) metabolism involving deamination to 5′-methylthioinosine (MTI) followed by N-ribosyl phosphorolysis to hypoxanthine and 5-methylthio-α-d-ribose 1-phosphate. The specific MTI phosphorylase of P. aeruginosa has been reported [Guan, R., Ho, M. C., Almo, S. C., and Schramm, V. L. (2011) Biochemistry 50, 1247-1254], and here we characterize MTA deaminase from P. aeruginosa (PaMTADA). Genomic analysis indicated the PA3170 locus to be a candidate for MTA deaminase (MTADA). Protein encoded by PA3170 was expressed and shown to deaminate MTA with 40-fold greater catalytic efficiency for MTA than for adenosine. The k _(cat)/K _m value of 1.6 × 10 ~7 M ~(-1) s ~(-1) for MTA is the highest catalytic efficiency known for an MTA deaminase. 5′-Methylthiocoformycin (MTCF) is a 4.8 pM transition state analogue for PaMTADA but causes no significant inhibition of human adenosine deaminase or MTA phosphorylase. MTCF is permeable to P. aeruginosa and exhibits an IC _(50) of 3 nM on cellular PaMTADA activity. PaMTADA is the only activity in P. aeruginosa extracts to act on MTA. MTA and 5-methylthio-α-d-ribose are involved in quorum sensing pathways; thus, PaMTADA is a potential target for quorum sensing. The crystal structure of PaMTADA in complex with MTCF shows the transition state mimic 8(R)-hydroxyl group in contact with a catalytic site Zn ~(2+), the 5′-methylthio group in a hydrophobic pocket, and the transition state mimic of the diazepine ring in contact with a catalytic site Glu.
机译:Pseudomonas铜绿假单胞菌具有5'-甲基硫核苷酸(MTA)代谢的不寻常的途径,涉及脱氨至5'-甲基硫氨酸(MTI),然后是N-核糖基磷解物与次黄嘌呤和5-甲基硫基-α-D-核糖1-磷酸盐。据报道了P.铜绿假单胞菌的特异性MTI磷酸化酶[关,R.,HO,MC,Almo,SC和Schramm,VL(2011)生物化学50,1247-1254],以及来自P. Aeruginosa的MTA deaminase (帕姆图塔)。基因组分析表明PA3170基因座是MTA脱氨酶(MTADA)的候选者。 PA3170编码的蛋白质被表达并显示为脱氨酸MTA,对于MTA的催化效率为40倍,而不是腺苷。 MTA的1.6×10〜7m〜(-1)S〜(-1)的K _(猫)/ k _m值是MTA脱氨酶已知的最高催化效率。 5'-甲基硫代霉素(MTCF)是PAMTADA的4.8 PM过渡状态类似物,但不会显着抑制人腺苷脱氨酶或MTA磷酸化酶。 MTCF可透气至铜绿假单胞菌,并在细胞庞大的活动上表现出3nm的IC _(50)。 Pamtada是P.铜绿假单胞菌提取物的唯一活性,以对MTA采取行动。 MTA和5-甲基硫胺-α-D-核糖参与批量传感途径;因此,Pamtada是批量传感的潜在目标。与MTCF复合物的PAMTADA的晶体结构表明,疏水性袋中的5'-甲基硫基,5'-甲基硫基组接触的过渡状态模拟8(R) - 羟基,和过渡状态模拟与催化部位Glu接触的二氮堇环。

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  • 来源
    《Biochemistry》 |2012年第45期|共10页
  • 作者单位

    Department of Biochemistry Albert Einstein College of Medicine Yeshiva University 1300 Morris Park Avenue Bronx NY 10461 United States;

    Department of Biochemistry Albert Einstein College of Medicine Yeshiva University 1300 Morris Park Avenue Bronx NY 10461 United States;

    Carbohydrate Chemistry Team Industrial Research Ltd. Lower Hutt New Zealand;

    Carbohydrate Chemistry Team Industrial Research Ltd. Lower Hutt New Zealand;

    Department of Biochemistry Albert Einstein College of Medicine Yeshiva University 1300 Morris Park Avenue Bronx NY 10461 United States;

    Department of Biochemistry Albert Einstein College of Medicine Yeshiva University 1300 Morris Park Avenue Bronx NY 10461 United States;

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  • 正文语种 eng
  • 中图分类 生物化学;
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