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首页> 外文期刊>Current Protocols in Bioinformatics >UNIT 13.31 Using the PRIDE Database and ProteomeXchange for Submitting and Accessing Public Proteomics Datasets
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UNIT 13.31 Using the PRIDE Database and ProteomeXchange for Submitting and Accessing Public Proteomics Datasets

机译：单元13.31使用vide数据库和proteomexchange来提交和访问公共蛋白质组学数据集

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摘要

The ProteomeXchange (PX) Consortium is the unifying framework for world-leading mass spectrometry (MS)–based proteomics repositories. Current members include the PRIDE database (U.K.), PeptideAtlas/PASSEL, and MassIVE (U.S.A.), and jPOST (Japan). TheConsortium standardizes submission and dissemination of public proteomics data worldwide. This is achieved through implementing common data submission guidelines and enforcing metadata requirements by each of the members. Furthermore, the members use acommon identifier space. Each dataset receives a unique (PXD) accession number and is publicly accessible as soon as the associated scientific publications are released. The two basic protocols provide a step-by-step guide on how to submit data to the PRIDE database, and describe how to access the PX portal (called ProteomeCentral), which can be used to search datasets available in any of the PX members.
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