Full-length transcriptome analysis of Misgurnus anguillicaudatus

Luo Wei; Wu Qing; Wang Tianzhu; Xu Zhou; Wang Dongjie; Wang Yan; Yang Song; Long Yuejin; Du Zongjun

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Full-length transcriptome analysis of Misgurnus anguillicaudatus

机译：Misgurnus AnguillicAudatus的全长转录组分析

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Faithful analysis of transcripts represents a critical component of the gene discovery, genomic characterization and annotation process in species without a reference genome. The present study generated 28,001 full-length transcripts of Misgurnus anguillicaudatus using the Pacific Bioscience (PacBio) single-molecule real-time (SMRT) sequencing system. A total of 77,346 consensus isoforms were identified, and 18,991 complete open reading frames (ORFs) detected. In total, 1345 lncRNAs were identified with high-confidence, with additional identification of a number of well-known transcription factors. The present study may facilitate additional exploration of the genomic signatures of M. anguillicaudatus.

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来源
《Marine genomics》 |2020年第1期|共5页
作者
Luo Wei; Wu Qing; Wang Tianzhu; Xu Zhou; Wang Dongjie; Wang Yan; Yang Song; Long Yuejin; Du Zongjun;
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作者单位

Sichuan Agr Univ Coll Anim Sci &

Technol Chengdu 611130 Peoples R China;

Sichuan Agr Univ Coll Anim Sci &

Technol Chengdu 611130 Peoples R China;

Sichuan Agr Univ Coll Anim Sci &

Technol Chengdu 611130 Peoples R China;

Sichuan Agr Univ Coll Anim Sci &

Technol Chengdu 611130 Peoples R China;

Sichuan Agr Univ Coll Anim Sci &

Technol Chengdu 611130 Peoples R China;

Sichuan Agr Univ Coll Anim Sci &

Technol Chengdu 611130 Peoples R China;

Sichuan Agr Univ Coll Anim Sci &

Technol Chengdu 611130 Peoples R China;

ZiyangYanjiang Dist Agr Bur Ziyang 641300 Peoples R China;

Sichuan Agr Univ Coll Anim Sci &

Technol Chengdu 611130 Peoples R China;

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原文格式 PDF
正文语种 eng
中图分类遗传学;
关键词
Full-length transcripts; Misgurnus anguillicaudatus; PacBio SMRT;

机译：全长成绩单;Misgurnus anguillicaudatus;PacBio SMRT;

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2. Effect of Fish Meal Replacement with Maggot Meal on the Growth Performance of Misgurnus anguillicaudatus [J] . Haitao ZHANG, Yuniong LI, Kailang GU, 农业生物技术：英文版 . 2016,第006期
3. Ecological Hatching Method for Misgurnus anguillicaudatus Fingerlings [J] . Liang Shaomin, Li Chunfa, Zhang Xiaolei 动物与饲料科学：英文版 . 2015,第001期
4. Full-length transcriptome of Misgurnus anguillicaudatus provides insights into evolution of genus Misgurnus [J] . Shaokui Yi, Xiaoyun Zhou, Jie Li, Scientific reports. . 2018,第1期

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5. Developmental transcriptome analysis and identification of genes involved in formation of intestinal air-breathing function of Dojo loach, Misgurnus anguillicaudatus [J] . Weiwei Luo, Xiaojuan Cao, Xiuwen Xu, Scientific reports. . 2016,第1期

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7. IN VITRO SELECTION OF HIGH-AFFINITY DNA LIGANDS FOR VITELLOGENIN IN CHINESE LOACH (Misgurnus Anguillicaudatus) USING CAPILLARY ELECTROPHORESIS [C] . Tao LI, Wenru LUO, Zhixin WANG, The 12th International Beijing Conference and Exhibition on Instrumental Analysis : Conference Abstracts . 2007

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Full-length transcriptome analysis of Misgurnus anguillicaudatus

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