First transcriptome assembly of a newly discovered vent mussel, Gigantidas vrijenhoeki, at Onnuri Vent Field on the northern Central Indian Ridge

Ryu Taewoo; Kim Jong Guk; Lee Jimin; Yu Ok Hwan; Yum Seungshic; Kim Dongsung; Woo Seonock

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First transcriptome assembly of a newly discovered vent mussel, Gigantidas vrijenhoeki, at Onnuri Vent Field on the northern Central Indian Ridge

机译：第一次新发现的发泄贻贝，Gigantidas Vrijenhoeki的第一次转录组合组装，在北部中部印度山脊上的onnuri排气领域

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This is the first report of a transcriptome assembly of a newly discovered hydrothermal vent mussel, Gigantidas vrijenhoeki (Bivalvia: Mytilidae), on the Central Indian Ridge. Gigantidas vrijenhoeki was identified from material collected at the newly discovered Onnuri Vent Field (OVF) on the Central Indian Ridge in 2018, and was reported as a new species, distinct from another dominant hydrothermal vent mussel, Bathymodiolus marisindicus, in 2020. We sequenced the transcriptome of G. vrijenhoeki using the Illumina HiSeq X System. De novo assembly and analysis of the coding regions predicted 25,405 genes, 84.76% of which was annotated by public databases. The transcriptome of G. vrijenhoeki will be a valuable resource in studying the ecological and biological characteristics of this new species, which is distinct from other deep-sea mussels. These data should also support the investigation of the relationship between the environmental conditions of hydrothermal vents and the unique distribution of G. vrijenhoeki in the OVF of the Central Indian Ridge.

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来源
《Marine genomics》 |2021年第1期|共6页
作者
Ryu Taewoo; Kim Jong Guk; Lee Jimin; Yu Ok Hwan; Yum Seungshic; Kim Dongsung; Woo Seonock;
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作者单位

Okinawa Inst Sci &

Technol Grad Univ Marine Climate Change Unit 1919-1 Tancha Onna Son Okinawa 9040495 Japan;

Korea Inst Ocean Sci &

Technol Marine Ecosyst &

Biol Res Ctr Busan 49111 South Korea;

Korea Inst Ocean Sci &

Technol Marine Ecosyst &

Biol Res Ctr Busan 49111 South Korea;

Korea Inst Ocean Sci &

Technol Marine Ecosyst &

Biol Res Ctr Busan 49111 South Korea;

Korea Inst Ocean Sci &

Technol Ecol Risk Res Div Geoje 53201 South Korea;

Korea Inst Ocean Sci &

Technol Marine Ecosyst &

Biol Res Ctr Busan 49111 South Korea;

Korea Inst Ocean Sci &

Technol Marine Biotechnol Res Ctr Busan 49111 South Korea;

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原文格式 PDF
正文语种 eng
中图分类遗传学;
关键词
Gigantidas vrijenhoeki; Mussel; Transcriptome; Hydrothermal vent; Onnuri Vent Field;

机译：Gigantidas Vrijenhoeki;贻贝;转录组;水热通风口;onnuri排气领域;

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1. Microbial community structure and nitrogenase gene diversity of sediment from a deep-sea hydrothermal vent field on the Southwest Indian Ridge [J] . WU Yuehong, CAO Yi, WANG Chunsheng, 海洋学报（英文版） . 2014,第010期
2. Newly discovered hydrothermal fields along the ultraslow-spreading Southwest Indian Ridge around 63°E [J] . CHEN Jie, HE Yonghua, TAO Chunhui, 海洋学报（英文版） . 2018,第011期
3. Use of portable X-ray fluorescence in the analysis of surficial sediments in the exploration of hydrothermal vents on the Southwest Indian Ridge [J] . LIAO Shili, TAO Chunhui, LI Huaiming, 海洋学报（英文版） . 2017,第007期
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5. A newly discovered Gigantidas bivalve mussel from the Onnuri Vent Field in the northern Central Indian Ridge [J] . Jang Sook-Jin, Phuong-Thao Ho, Jun Si-Yeong, Deep-Sea Research . 2020,第Jula期

机译：来自北部印度山脊的南乌里通风口的新发现的Gigantiidas双抗体
6. The first reference transcriptome assembly of the stalked barnacle, Neolepas marisindica, from the Onnuri Vent Field on the Central Indian Ridge [J] . Ryu Taewoo, Woo Seonock, Lee Nayoung Marine genomics . 2019,第期

机译：第一个参考印度脊上的onnuri排气领域的缠绕的栏杆，Neolepas Marisindica的第一个参考转录组合组装
7. Thermococcus indicus sp. nov., a Fe(III)-reducing hyperthermophilic archaeon isolated from the Onnuri Vent Field of the Central Indian Ocean ridge [J] . Jae Kyu Lim, Yun Jae Kim, Jhung-Ahn Yang, The journal of microbiology . 2020,第4期

机译：热电偶indecus sp。 11月。，一种从中央印度洋山脊的南乌里通风领域孤立的Fe（III）-Reeduction archaeon
8. Optical methods to monitor temporal changes at the seafloor: The Lucky Strike deep-sea hydrothermal vent field (Mid-Atlantic Ridge) [C] . Escartin J., Garcia R., Barreyre T., 2013 IEEE International Underwater Technology Symposium . 2013

机译：监测海底时间变化的光学方法：“幸运罢工”深海热液喷口场（中大西洋海脊）
9. Mineralogy and Geochemistry of contrasting hydrothermal systems on the Arctic Mid Ocean Ridge (AMOR): The Jan Mayen and Loki's Castle vent fields [D] . Cruz, Maria Inês Ferreira Silva da 2015

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10. Nearest vent dearest friend: biodiversity of Tiancheng vent field reveals cross-ridge similarities in the Indian Ocean [O] . Jin Sun, Yadong Zhou, Chong Chen, 2020

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机译：幸运罢工水热场，中大西洋脊（37°N）的空间变化：来自新发现的Capelinhos通风口的海底流量几何的更新
12. Report on the first manned operation of the recently discovered Indian Ocean hydrothermal vent systems [R] . Venkateswaran, K. 2002

机译：关于最近发现的印度洋热液喷口系统首次载人运行的报告

First transcriptome assembly of a newly discovered vent mussel, Gigantidas vrijenhoeki, at Onnuri Vent Field on the northern Central Indian Ridge

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