Implementing an X-ray validation pipeline for the Protein Data Bank

GoreS.; VelankarS.; KleywegtG.J.

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Implementing an X-ray validation pipeline for the Protein Data Bank

机译：实现x射线验证的管道蛋白质数据银行

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摘要

There is an increasing realisation that the quality of the biomacromolecular structures deposited in the Protein Data Bank (PDB) archive needs to be assessed critically using established and powerful validation methods. The Worldwide Protein Data Bank (wwPDB) organization has convened several Validation Task Forces (VTFs) to advise on the methods and standards that should be used to validate all of the entries already in the PDB as well as all structures that will be deposited in the future. The recommendations of the X-ray VTF are currently being implemented in a software pipeline. Here, ongoing work on this pipeline is briefly described as well as ways in which validation-related information could be presented to users of structural data.

机译：人们越来越认识到biomacromolecular结构的质量存入蛋白质数据库(PDB)存档需要使用建立批判性的评估和强大的验证方法。蛋白质数据库(wwPDB)组织召集几个验证任务部队(VTFs)建议的方法和标准被用来验证已经在所有的条目PDB以及所有结构沉积在未来。x射线VTF目前正在实施一个软件管道。简要描述以及管道的方法validation-related信息可以吗结构数据的呈现给用户。

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来源
《Acta crystallographica.Section D. Biological crystallography》 |2012年第4期|478-483|共6页
作者
GoreS.; VelankarS.; KleywegtG.J.;
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作者单位

Protein Data Bank in Europe (PDBe), EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10;

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原文格式 PDF
正文语种英语
中图分类化学;
关键词
Data Archiving; Protein Data Bank; pipeline;

机译：数据归档;蛋白质数据银行;管道;

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Implementing an X-ray validation pipeline for the Protein Data Bank

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