Putative recombination events and evolutionary history of five economically important viruses of fruit trees based on coat protein-encoding gene sequence analysis.

Boulila M

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Putative recombination events and evolutionary history of five economically important viruses of fruit trees based on coat protein-encoding gene sequence analysis.

机译：基于外壳蛋白编码基因序列分析的五种重要经济果树病毒的推定重组事件和进化史。

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To enhance the knowledge of recombination as an evolutionary process, 267 accessions retrieved from GenBank were investigated, all belonging to five economically important viruses infecting fruit crops (Plum pox, Apple chlorotic leaf spot, Apple mosaic, Prune dwarf, and Prunus necrotic ringspot viruses). Putative recombinational events were detected in the coat protein (CP)-encoding gene using RECCO and RDP version 3.31beta algorithms. Based on RECCO results, all five viruses were shown to contain potential recombination signals in the CP gene. Reconstructed trees with modified topologies were proposed. Furthermore, RECCO performed better than the RDP package in detecting recombination events and exhibiting their evolution rate along the sequences of the five viruses. RDP, however, provided the possible major and minor parents of the recombinants. Thus, the two methods should be considered complementary.

机译：为了增强重组作为进化过程的知识，对从GenBank中检索到的267个种质进行了研究，它们均属于五种感染水果作物的重要经济病毒（李子痘病毒，苹果绿萎病叶斑病，苹果花叶病毒，西梅矮星和李属坏死环斑病毒）。。使用RECCO和RDP版本3.31beta算法在外壳蛋白（CP）编码基因中检测到推定的重组事件。根据RECCO结果，所有五种病毒均显示在CP基因中含有潜在的重组信号。提出了具有修改后拓扑的重构树。此外，RECCO在检测重组事件并沿五种病毒的序列展示其进化速率方面比RDP软件包表现更好。但是，RDP提供了重组体的可能的主要和次要亲本。因此，这两种方法应视为互补。

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《Biochemical Genetics》 |2010年第6期|共19页
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Boulila M;
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正文语种 eng
中图分类遗传学;
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1. Putative recombination events and evolutionary history of five economically important viruses of fruit trees based on coat protein-encoding gene sequence analysis. [J] . Boulila M Biochemical Genetics . 2010,第5a6期

机译：基于外壳蛋白编码基因序列分析的五种重要经济果树病毒的推定重组事件和进化史。
2. Putative recombination events and evolutionary history of five economically important viruses of fruit trees based on coat protein-encoding gene sequence analysis. [J] . Boulila M Biochemical Genetics . 2010,第5a6期

机译：基于涂层蛋白编码基因序列分析的果树五种经济上重要病毒的推定重组事件和进化史。
3. Putative Recombination Events and Evolutionary History of Five Economically Important Viruses of Fruit Trees Based on Coat Protein-Encoding Gene Sequence Analysis [J] . Moncef Boulila Biochemical Genetics . 2010,第s5a6期

机译：基于外壳蛋白编码基因序列分析的五种重要经济果树病毒的假定重组事件和进化史
4. Relationships between Parasitoid Wasps (Hymenoptera: Braconidae: Opiinae), Fruit Flies (Diptera: Tephritidae) and Their Host Plants Based on 16S rRNA, 12S rRNA, and ND1 Gene Sequences [C] . N. J. Ibrahim, B. M. Md-Zain, S. Yaakop UKM FST Postgraduate Colloquium . 2013

机译：寄生虫黄蜂（Hymenoptera：Braconidae：Opiinae），果蝇（Diptera：Tephritidae）及其宿主植物基于16s rRNA，12s rRNA和ND1基因序列的关系
5. Utilizing Next Generation Sequencing to Generate Bacterial Genomic Sequences for Evolutionary Analysis. [D] . Scott, Derrick C. 2014

机译：利用下一代测序生成细菌基因组序列进行进化分析。
6. Evolutionary relationship between luteoviruses and other RNA plant viruses based on sequence motifs in their putative RNA polymerases and nucleic acid helicases. [O] . N Habili, R H Symons 1989

机译：黄体病毒和其他RNA植物病毒之间基于其假定的RNA聚合酶和核酸解旋酶中的序列基序的进化关系。
7. Evolutionary relationship between luteoviruses and other RNA plant viruses based on sequence motifs in their putative RNA polymerases and nucleic acid helicases. [O] . Habili, N, Symons, R H 1989

机译：黄体病毒和其他RNA植物病毒之间基于其假定的RNA聚合酶和核酸解旋酶中的序列基序的进化关系。

Putative recombination events and evolutionary history of five economically important viruses of fruit trees based on coat protein-encoding gene sequence analysis.

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