EXP-PAC: Providing comparative analysis and storage of next generation gene expression data

ChurchP.C.; GoscinskiA.; LefèvreC.

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EXP-PAC: Providing comparative analysis and storage of next generation gene expression data

机译：EXP-PAC：提供下一代基因表达数据的比较分析和存储

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Microarrays and more recently RNA sequencing has led to an increase in available gene expression data. How to manage and store this data is becoming a key issue. In response we have developed EXP-PAC, a web based software package for storage, management and analysis of gene expression and sequence data. Unique to this package is SQL based querying of gene expression data sets, distributed normalization of raw gene expression data and analysis of gene expression data across experiments and species. This package has been populated with lactation data in the international milk genomic consortium web portal (http://milkgenomics.org/). Source code is also available which can be hosted on a Windows, Linux or Mac APACHE server connected to a private or public network (http://mamsap.it.deakin.edu.au/~pcc/Release/EXP_PAC.html).

机译：基因芯片和最近的RNA测序导致可用基因表达数据的增加。如何管理和存储这些数据已成为一个关键问题。作为回应，我们开发了EXP-PAC，这是一个基于Web的软件包，用于存储，管理和分析基因表达和序列数据。该软件包的独特之处在于基于SQL的基因表达数据集查询，原始基因表达数据的分布式归一化以及跨实验和物种的基因表达数据分析。该包装已在国际牛奶基因组协会网站（http://milkgenomics.org/）上填充了泌乳数据。也提供源代码，这些源代码可以托管在连接到专用或公用网络的Windows，Linux或Mac APACHE服务器上（http://mamsap.it.deakin.edu.au/~pcc/Release/EXP_PAC.html）。

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《Genomics》 |2012年第1期|共6页
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ChurchP.C.; GoscinskiA.; LefèvreC.;
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正文语种 eng
中图分类医学遗传学;
关键词
Comparative analysis; Database; Gene expression; Microarray;

机译：比较分析;数据库;基因表达;微阵列;

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EXP-PAC: Providing comparative analysis and storage of next generation gene expression data

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