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Recent advances and concepts in substrate specificity determination of proteases using tailored libraries of fluorogenic substrates with unnatural amino acids

机译:使用具有非天然氨基酸的荧光底物的量身定制的库,在蛋白酶的底物特异性测定中的最新进展和概念

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摘要

Substrate specificity of proteases can be determined using several methods among which the most frequently used are positional scanning library, proteomics and phage display. Classic approaches can deliver information about preferences for natural amino acids in binding pockets of virtually all proteases. However, recent studies demonstrate the ability to obtain much more information by application of unnatural amino acids to positional scanning library approaches. This knowledge can be used for the design of more active and specific substrates, inhibitors and activity based probes. In this minireview we describe recent strategies and concepts for the design and application of fluorogenic substrates library tailored for exopeptidases and endopeptidases.
机译:蛋白酶的底物特异性可以使用几种方法确定,其中最常用的是位置扫描文库,蛋白质组学和噬菌体展示。经典方法可以在几乎所有蛋白酶的结合口袋中提供有关天然氨基酸偏好的信息。但是,最近的研究表明,通过将非天然氨基酸应用于位置扫描库方法,可以获得更多信息的能力。该知识可用于设计更具活性和特异性的底物,抑制剂和基于活性的探针。在本小型审查中,我们描述了针对外肽酶和内肽酶量身定制的荧光底物文库的设计和应用的最新策略和概念。

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