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Method for determining the presence or absence of Shiga toxin-producing Escherichia coli (STEC) in food samples

机译:食品样品中是否存在产生志贺毒素的大肠杆菌(STEC)的测定方法

摘要

The present invention relates to a method which will lead within a shorter period of time to reliable results with respect to the presence or absence of pathogenic STEC (Shiga toxin-producing Escherichia coli) in food samples. The method comprises - incubating the food sample in a culture medium enabling growth of E. coli to obtain an E. coli stock medium; - performing a lysis of the E. coli in the stock medium to obtain a sample solution comprising E. coli DNA; and - subjecting the sample solution to a first series of polymerase chain reactions (PCR), using primers to amplify the following E. coli genes or fragments thereof: €¢ stx1 and/or stx2 encoding Shiga toxin 1 and Shiga toxin 2, respectively, €¢ for each STEC serogroup to be determined, the subtype of the eae gene of that serogroup encoding an intimin, and €¢ for each STEC serogroup to be determined, a biomarker gene specific for that serogroup; and, in case that stx1 and/or stx2 as well as the eae gene and the specific biomarker gene for at least one serogroup are amplified in the first series of PCRs: - verifying the presence of the one or more specific serogroups of STEC by performing a second series of PCRs on concentrates of the E. coli stock medium and, optionally, a third series of PCRs on single E. coli colonies derived from the concentrates.
机译:本发明涉及一种方法,该方法将在较短的时间内就食物样品中是否存在病原性STEC(产生志贺氏毒素的大肠杆菌)产生可靠的结果。该方法包括-将食物样品在能使大肠杆菌生长的培养基中孵育以获得大肠杆菌储备培养基;-在储备培养基中裂解大肠杆菌以获得包含大肠杆菌DNA的样品溶液;和-使用引物扩增以下大肠杆菌基因或其片段,使样品溶液经历第一系列的聚合酶链反应(PCR):€¢stx1和/或stx2分别编码志贺毒素1和志贺毒素2,每个要确定的STEC血清群的€¢,该血清群的eae基因的亚型编码的内膜蛋白,以及€¢:每个待确定的STEC血清群,该血清群特有的生物标记基因;并且,如果在第一系列PCR中扩增了至少一个血清群的stx1和/或stx2以及eae基因和特定生物标记基因,则:-通过对大肠杆菌原代培养基的浓缩物进行第二系列PCR,以及任选地对源自浓缩物的单个大肠杆菌菌落进行第三系列PCR,来验证STEC的一个或多个特定血清群的存在。

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