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Development of low-cost microfluidic diagnostics for point-of-care testing.

机译:研发用于即时检验的低成本微流体诊断仪。

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摘要

In the past several decades, tremendous progress has been made in drug discovery, treatment of diseases and overall patient care. But clinical diagnostics is still lagging behind primarily due to its dependence on central labs which often result in delayed or missed diagnosis of diseases. Point-of-care testing (POCT) holds the promise of revolutionizing diagnostics by enabling clinical tests at near-patient settings and in resource-poor environments.; The objective of this thesis work has been to develop hand-held devices with microfluidic addressability to enable point-of-care immunodiagnostics and nucleic-acids based testing. The microfluidic devices were fabricated in thermoplastics using micro-hot-embossing and thermal bonding techniques in an effort to make them cost-efficient for disposable applications. The plastic microfluidic platform was then developed into a disposable immunosensor for testing of disease-related protein biomarkers in clinical samples. The system was able to detect femtomolar concentrations of C-reactive protein using a chemiluminescent ELISA technique. The detection limit of the microfluidic chemiluminescent assay was significantly better than both conventional colorimetric assays and microfluidic fluorescence immunoassays. The assay results were read via an on-board instant photographic film, which obviates the need for any dedicated bench-top analyzer, and therefore makes the device self-sufficient for point-of-care diagnostics when simple positive/negative results are sought.; The microfluidic analytical platform was also applied to on-chip sample preparation to facilitate microchip-based molecular diagnostics (nucleic acid testing) The availability of robust, cost-effective and disposable sample preparation platforms is the much needed catalyst that can accelerate the penetration of nucleic acid-based tests into the in vitro diagnostics market. On-chip cell lysis was achieved by diffusive mixing of the sample with lysis reagents in serpentine mixing channels. The isolation and purification of nucleic acids from the lysates was performed via solid-phase extraction in the microfluidic channels. The solid-phase consisted of a microporous polymer monolith embedded with functional microparticles and covalently attached to the channel walls via photoinitiated grafting. The in situ photografting process and the porous polymer monolith chemistry used here are very versatile and can be used to entrap any micro- or nanoparticles to form functionalized solid-phases within UV transparent thermoplastic microchips. For DNA and total RNA purification, the microporous polymer monolith was impregnated with silica particles, and the extraction was achieved due to the preferential binding of nucleic acids to the silica particles in the presence of chaotropic salts. The sample preparation system was shown to purify and concentrate phage lambda DNA, human genomic DNA from whole blood, and viral RNA from infected mammalian cells. The extraction efficiency of the system was 70% +/- 3% and the nucleic acid binding capacity of the solid-phase was found to be approximately 4.0 ng. The micro solid-phase system was also used for the extraction of mRNA by embedding oligo(dT) beads in the porous monolith. The system was able to extract mRNAs of both abundant and rare genes from total RNA as well as from whole cell lysates. The micro solid-phase extraction technology presented lays the groundwork for a high-throughput nucleic acid sample preparation platform that can eventually be coupled with a downstream amplification/detection module to form an integrated molecular diagnostic device.
机译:在过去的几十年中,在药物发现,疾病治疗和整体患者护理方面取得了巨大进步。但是临床诊断仍然滞后,主要是因为它依赖于中央实验室,这常常导致疾病诊断的延迟或遗漏。即时检验(POCT)有望通过在接近患者的环境和资源匮乏的环境中进行临床检验来彻底改变诊断方法。本论文工作的目的是开发具有微流体寻址能力的手持式设备,以实现即时免疫诊断和基于核酸的测试。微流体装置是使用微热压印和热粘合技术由热塑性塑料制成的,旨在使它们在一次性应用中具有成本效益。然后,将塑料微流控平台开发为用于测试临床样本中与疾病相关的蛋白质生物标记物的一次性免疫传感器。该系统能够使用化学发光ELISA技术检测飞摩尔浓度的C反应蛋白。微流体化学发光测定的检测限明显优于常规比色测定和微流体荧光免疫测定。通过板载即时摄影胶片读取化验结果,从而无需任何专用的台式分析仪,因此,当寻求简单的阳性/阴性结果时,该设备可满足现场诊断的需求。 ;微流体分析平台还被应用于芯片上样品制备,以促进基于微芯片的分子诊断(核酸测试)强大,经济高效且可抛弃的样品制备平台的可用性是急需的催化剂,可以加速核酸的渗透基于酸的测试进入了体外诊断市场。通过将样品与裂解试剂在蛇形混合通道中进行扩散混合来实现片上细胞裂解。从裂解物中分离和纯化核酸是通过微流体通道中的固相萃取进行的。固相由嵌入有功能性微粒并通过光引发接枝共价连接到通道壁的微孔聚合物整体组成。此处使用的原位光接枝过程和多孔聚合物整体化学非常通用,可用于捕获任何微颗粒或纳米颗粒,以在UV透明热塑性微芯片内形成功能化的固相。对于DNA和总RNA纯化,微孔聚合物整料被二氧化硅颗粒浸渍,并且由于在离液盐的存在下核酸与二氧化硅颗粒的优先结合而实现了提取。样品制备系统已显示可纯化和浓缩噬菌体λDNA,全血中的人类基因组DNA和感染的哺乳动物细胞中的病毒RNA。该系统的提取效率为70%+ /-3%,并且发现固相的核酸结合能力为约4.0ng。通过将oligo(dT)珠嵌入多孔整料中,微固相系统也用于提取mRNA。该系统能够从总RNA以及全细胞裂解物中提取丰富基因和稀有基因的mRNA。提出的微固相萃取技术为高通量核酸样品制备平台奠定了基础,该平台最终可以与下游的扩增/检测模块结合以形成集成的分子诊断设备。

著录项

  • 作者

    Bhattacharyya, Arpita.;

  • 作者单位

    Boston University.;

  • 授予单位 Boston University.;
  • 学科 Engineering Biomedical.
  • 学位 Ph.D.
  • 年度 2008
  • 页码 162 p.
  • 总页数 162
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 生物医学工程;
  • 关键词

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