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GAPscreener: An automatic tool for screening human genetic association literature in PubMed using the support vector machine technique

机译：GAPscreener：使用支持向量机技术在PubMed中筛选人类遗传协会文献的自动工具

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摘要

BackgroundSynthesis of data from published human genetic association studies is a critical step in the translation of human genome discoveries into health applications. Although genetic association studies account for a substantial proportion of the abstracts in PubMed, identifying them with standard queries is not always accurate or efficient. Further automating the literature-screening process can reduce the burden of a labor-intensive and time-consuming traditional literature search. The Support Vector Machine (SVM), a well-established machine learning technique, has been successful in classifying text, including biomedical literature. The GAPscreener, a free SVM-based software tool, can be used to assist in screening PubMed abstracts for human genetic association studies.

机译：背景技术从已发表的人类遗传关联研究中合成数据是将人类基因组发现转化为健康应用的关键步骤。尽管遗传关联研究在PubMed中占据了很大一部分摘要，但是使用标准查询来识别它们并不总是准确或有效的。进一步使文献筛选过程自动化可以减轻劳动密集型和费时的传统文献搜索的负担。支持向量机（SVM）是一种完善的机器学习技术，已成功地对文本进行了分类，包括生物医学文献。 GAPscreener是一个免费的基于SVM的软件工具，可用于协助筛选PubMed摘要以进行人类遗传关联研究。

著录项

期刊名称 BMC Bioinformatics
作者
Wei Yu; Melinda Clyne; Siobhan M Dolan; Ajay Yesupriya; Anja Wulf; Tiebin Liu; Muin J Khoury; Marta Gwinn;
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年(卷),期 2008(9),-1
年度 2008
页码 205
总页数 9
原文格式 PDF
正文语种
中图分类应用微生物学;生化遗传学;生化药理学;
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专利

1. GAPscreener: An automatic tool for screening human genetic association literature in PubMed using the support vector machine technique [J] . Wei Yu, Melinda Clyne, Siobhan M Dolan, BMC Bioinformatics . 2008,第1期

机译：GAPscreener：使用支持向量机技术在PubMed中筛选人类遗传协会文献的自动工具
2. Colander: A probability-based support vector machine algorithm for automatic screening for CID spectra of phosphopeptides prior to database search [J] . Lu BW, Ruse CI, Yates JR Journal of proteome research . 2008,第8期

机译：Colander：一种基于概率的支持向量机算法，用于在数据库搜索之前自动筛选磷酸肽的CID光谱
3. Automatic EEG eyeblink artefact identification and removal technique using independent component analysis in combination with support vector machines and denoising autoencoder [J] . Phadikar Souvik, Sinha Nidul, Ghosh Rajdeep Signal Processing, IET . 2020,第6期

机译：自动EEG eEGBELINK伪造识别和使用独立分量分析与支持向量机和去噪的自动化器
4. Automatic detection of learning styles in learning management system by using literature-based method and support vector machine [C] . Elfa Silfiana Amir, Malikus Sumadyo, Dana Indra Sensuse, International Conference on Advanced Computer Science and Information Systems . 2016

机译：基于文献的方法和支持向量机在学习管理系统中学习风格的自动检测
5. Real-time automatic assessment of obstructive sleep apnea and sleep quality: Using the electrocardiogram and support vector machines. [D] . Bsoul, Majdi. 2010

机译：实时自动评估阻塞性睡眠呼吸暂停和睡眠质量：使用心电图和支持向量机。
6. Colander: A probability-based support vector machine-learning algorithm for automatic screening for CID spectra of phosphopeptides prior to database search [O] . Bingwen Lu, Cristian I. Ruse, John R. Yates III -1

机译：Colander：一种基于概率的支持向量机学习算法用于在数据库搜索之前自动筛选磷酸肽的CID光谱
7. GAPscreener: An automatic tool for screening human genetic association literature in PubMed using the support vector machine technique [O] . Wei Yu, Melinda Clyne, Siobhan M Dolan, 2008

机译：GAPscreener：使用支持向量机技术在PubMed中筛选人类遗传协会文献的自动工具

GAPscreener: An automatic tool for screening human genetic association literature in PubMed using the support vector machine technique

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