Complete genome anatomy of the emerging potato pathogen Dickeya solani type strain IPO 2222 T

Slimane Khayi; Pauline Blin; Teik Min Chong; Kok-Gan Chan; Denis Faure

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Complete genome anatomy of the emerging potato pathogen Dickeya solani type strain IPO 2222 T

机译：新兴马铃薯病原体Dickeya solani型菌株IPO 2222 T的完整基因组解剖

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Several species of the genus Dickeya provoke soft rot and blackleg diseases on a wide range of plants and crops. Dickeya solani has been identified as the causative agent of diseases outbreaks on potato culture in Europe for the last decade. Here, we report the complete genome of the D. solani IPO 2222supT/sup. Using PacBio and Illumina technologies, a unique circular chromosome of 4,919,833 bp was assembled. The G?+?C content reaches 56% and the genomic sequence contains 4,059 predicted proteins. The ANI values calculated for D. solani IPO 2222supT/sup vs. other available D. solani genomes was over 99.9% indicating a high genetic homogeneity within D. solani species.

机译：迪卡属（Dickeya）的几种物种在多种植物和农作物上引起软腐和黑腿病。在过去的十年中，茄ic（Dickeya solani）已被确认为欧洲马铃薯养殖疾病暴发的病原体。在这里，我们报告了D. solani IPO 2222 T 的完整基因组。使用PacBio和Illumina技术，组装了一个4,919,833 bp的独特环形染色体。 G + + C含量达到56％，基因组序列含有4,059个预测的蛋白质。相对于其他可利用的D. solani基因组，针对D. solani IPO 2222 T 计算得出的ANI值超过99.9％，表明D. solani种内具有高度的遗传同质性。

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《Standards in Genomic Sciences》 |2016年第1期|共页
作者
Slimane Khayi; Pauline Blin; Teik Min Chong; Kok-Gan Chan; Denis Faure;
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中图分类遗传学;
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Short genome reportDickeya solaniBlacklegSoft rotGenomePotato;

机译：短基因组报告Dickeya solaniBlacklegSoft rotGenomePotato;

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专利

1. Genome Sequence of the Emerging Plant Pathogen Dickeya solani Strain RNS 08.23.3.1A [J] . Slimane Khayi, Samuel Mondy, Amélie Beury-Cirou, Genome Announcements . 2014,第1期

机译：新兴植物病原菌Dickeya solani菌株RNS的基因组序列08.23.3.1A
2. Genomic and metabolic comparison with Dickeya dadantii 3937 reveals the emerging Dickeya solani potato pathogen to display distinctive metabolic activities and T5SS/T6SS-related toxin repertoire [J] . Jacques Pédron, Samuel Mondy, Yannick Raoul des Essarts, BMC Genomics . 2014,第1期

机译：与Dickeya dadantii 3937的基因组和代谢比较显示，新兴的Dickeya solani马铃薯病原体显示出独特的代谢活性和与T5SS / T6SS相关的毒素库
3. Genome Sequence of Dickeya solani, a New soft Rot Pathogen of Potato, Suggests its Emergence May Be Related to a Novel Combination of Non-Ribosomal Peptide/Polyketide Synthetase Clusters [J] . Lars Paulin, Leo Rouhiainen, Liisa Holm, Diversity . 2013,第4期

机译：马铃薯新的软腐病病原菌Dickeya solani的基因组序列表明，其出现可能与非核糖体肽/聚酮化合物合成酶簇的新型结合有关
4. Shuffling Classification of High Risk Pathogens After Complete Genome Sequencing [C] . Takayuki Ezaki International symposium on bacterial genomics, evolution and pathogenesis. . 2010

机译：全基因组测序后高风险病原体的改组分类
5. Studies on expression of an antifungal gene maize chitinase in tobacco and potato and its effect on growth and the fungal pathogen Rhizoctonia solani [D] . Patil, Veerendra Revanappa 1995

机译：抗真菌基因玉米几丁质酶在烟草和马铃薯中的表达及其对生长和真菌病原菌Rhozoctonia solani的影响的研究
6. Complete genome anatomy of the emerging potato pathogen Dickeya solani type strain IPO 2222T [O] . Slimane Khayi, Pauline Blin, Teik Min Chong, 2016

机译：新兴马铃薯病原体Dickeya solani型菌株IPO 2222T的完整基因组解剖
7. Complete genome anatomy of the emerging potato pathogen Dickeya solani type strain IPO 2222(T). [O] . Khayi, Slimane, Blin, Pauline, Chong, Teik Min, 2016

机译：新兴的马铃薯病原菌Dickeya solani型菌株IPO 2222（T）的完整基因组解剖。

Complete genome anatomy of the emerging potato pathogen Dickeya solani type strain IPO 2222 T

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