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Isolation of SARS-CoV-2-related coronavirus from Malayan pangolins

机译:从马来西亚植物植物中分离SARS-COV-2相关冠状病毒

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摘要

The current outbreak of coronavirus disease-2019 (COVID-19) poses unprecedented challenges to global health(1). The new coronavirus responsible for this outbreak-severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)-shares high sequence identity to SARS-CoV and a bat coronavirus, RaTG13(2). Although bats may be the reservoir host for a variety of coronaviruses(3,4), it remains unknown whether SARS-CoV-2 has additional host species. Here we show that a coronavirus, which we name pangolin-CoV, isolated from a Malayan pangolin has 100%, 98.6%, 97.8% and 90.7% amino acid identity with SARS-CoV-2 in the E, M, N and S proteins, respectively. In particular, the receptor-binding domain of the S protein of pangolin-CoV is almost identical to that of SARS-CoV-2, with one difference in a noncritical amino acid. Our comparative genomic analysis suggests that SARS-CoV-2 may have originated in the recombination of a virus similar to pangolin-CoV with one similar to RaTG13. Pangolin-CoV was detected in 17 out of the 25 Malayan pangolins that we analysed. Infected pangolins showed clinical signs and histological changes, and circulating antibodies against pangolin-CoV reacted with the S protein of SARS-CoV-2. The isolation of a coronavirus from pangolins that is closely related to SARS-CoV-2 suggests that these animals have the potential to act as an intermediate host of SARS-CoV-2. This newly identified coronavirus from pangolins-the most-trafficked mammal in the illegal wildlife trade-could represent a future threat to public health if wildlife trade is not effectively controlled.
机译:目前的冠状病毒病 - 2019年(Covid-19)对全球健康(1)造成了前所未有的挑战。负责这种爆发严重的急性呼吸综合征冠状病毒2(SARS-COV-2)的新冠状病毒 - SARS-COV和蝙蝠冠状病毒,RATG13(2)的高序列同一性。虽然蝙蝠可能是各种冠状虫病毒(3,4)的储层宿主,但仍然未知SARS-COV-2是否具有额外的宿主物种。在这里,我们展示了冠状病毒,其中从马来亚植物中分离出来的鹅唑啉-CoV,在e,m,n和s蛋白中的SARS-COV-2具有100%,98.6%,97.8%和90.7%氨基酸同一性, 分别。特别地,Pangolin-CoV的S蛋白的受体结合结构域与SARS-COV-2的蛋白质结合结构域几乎相同,非临界氨基酸的一个差异。我们的比较基因组分析表明,SARS-COV-2可能已经起源于类似于Pangolin-CoV的病毒的重组,其中一个类似于RATG13。在我们分析的25名马来山山谷中,在17中检测到Pangolin-CoV。受感染的植物蛋白显示临床症状和组织学变化,并对Pangolin-CoV的循环抗体与SARS-COV-2的S蛋白反应。从与SARS-COV-2密切相关的Pangolins的分离冠状病毒表明这些动物具有充当SARS-COV-2的中间宿主的潜力。来自植物素的新鉴定的冠状病毒 - 非法野生动物贸易中最贩运的哺乳动物 - 如果没有有效控制野生动物贸易,可能代表对公共卫生的未来威胁。

著录项

  • 来源
    《Nature》 |2020年第7815期|286-289|共4页
  • 作者单位

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China|Guangdong Lab Lingnan Modern Agr Guangzhou Peoples R China;

    Guangzhou Zoo Guangzhou Peoples R China|Guangzhou Wildlife Res Ctr Guangzhou Peoples R China;

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China|Guangdong Lab Lingnan Modern Agr Guangzhou Peoples R China;

    Guangzhou Zoo Guangzhou Peoples R China|Guangzhou Wildlife Res Ctr Guangzhou Peoples R China;

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China|Guangdong Lab Lingnan Modern Agr Guangzhou Peoples R China;

    Guangdong Prov Wildlife Rescue Ctr Guangzhou Peoples R China;

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China|Guangdong Lab Lingnan Modern Agr Guangzhou Peoples R China;

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China|Guangdong Lab Lingnan Modern Agr Guangzhou Peoples R China;

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China;

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China;

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China;

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China|Guangdong Lab Lingnan Modern Agr Guangzhou Peoples R China;

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China|Guangdong Lab Lingnan Modern Agr Guangzhou Peoples R China;

    China Agr Univ Coll Biol Sci State Key Lab Agrobiotechnol Beijing Peoples R China;

    China Agr Univ Coll Biol Sci State Key Lab Agrobiotechnol Beijing Peoples R China;

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China|Zhaoqing Branch Ctr Guangdong Lab Lingnan Modern Agr Sci & Technol Zhaoqing Peoples R China;

    Guangzhou Zoo Guangzhou Peoples R China|Guangzhou Wildlife Res Ctr Guangzhou Peoples R China;

    Guangzhou Zoo Guangzhou Peoples R China|Guangzhou Wildlife Res Ctr Guangzhou Peoples R China;

    Guangzhou Zoo Guangzhou Peoples R China|Guangzhou Wildlife Res Ctr Guangzhou Peoples R China;

    Guangzhou Zoo Guangzhou Peoples R China|Guangzhou Wildlife Res Ctr Guangzhou Peoples R China;

    Guangzhou Zoo Guangzhou Peoples R China|Guangzhou Wildlife Res Ctr Guangzhou Peoples R China;

    Guangdong Prov Wildlife Rescue Ctr Guangzhou Peoples R China;

    Guangzhou Zoo Guangzhou Peoples R China|Guangzhou Wildlife Res Ctr Guangzhou Peoples R China;

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China|Guangdong Lab Lingnan Modern Agr Guangzhou Peoples R China;

    South China Agr Univ Coll Vet Med Ctr Emerging & Zoonot Dis Guangzhou Peoples R China|Guangdong Lab Lingnan Modern Agr Guangzhou Peoples R China;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
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  • 正文语种 eng
  • 中图分类
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