Genome sequence of Phaeobacter caeruleus type strain (DSM 24564T), a surface-associated member of the marine Roseobacter clade

Paul G. Beyersmann; Olga Chertkov; Jörn Petersen; Anne Fiebig; Amy Chen; Amrita Pati; Natalia Ivanova; Alla Lapidus; Lynne A. Goodwin; Patrick Chain; John C. Detter; Manfred Rohde; Sabine Gronow; Nikos C. Kyrpides; Tanja Woyke; Meinhard Simon; Markus Göker; Hans-Peter Klenk; Thorsten Brinkhoff

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Genome sequence of Phaeobacter caeruleus type strain (DSM 24564T), a surface-associated member of the marine Roseobacter clade

机译：海洋玫瑰红杆菌进化枝的表面相关成员，Phaeobacter caeruleus型菌株（DSM 24564T）的基因组序列。

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In 2009 Phaeobacter caeruleus was described as a novel species affiliated with the marine Roseobacter clade, which, in turn, belongs to the class Alphaproteobacteria. The genus Phaeobacter is well known for members that produce various secondary metabolites. Here we report of putative quorum sensing systems, based on the finding of six N-acyl-homoserine lactone synthetases, and show that the blue color of P. caeruleus is probably due to the production of the secondary metabolite indigoidine. Therefore, P. caeruleus might have inhibitory effects on other bacteria. In this study the genome of the type strain DSM 24564T was sequenced, annotated and characterized. The 5,344,419 bp long genome with its seven plasmids contains 5,227 protein-coding genes (3,904 with a predicted function) and 108 RNA genes.

机译：在2009年，藻蓝藻被描述为与海洋玫瑰杆菌属相关的一个新物种，而后者又属于丙酸杆菌属。杆状杆菌属以产生各种次级代谢产物的成员而闻名。在这里，我们基于六个N-酰基-高丝氨酸内酯合成酶的发现，报告了假定的群体感应系统，并显示了青枯菌的蓝色可能是由于次生代谢产物靛蓝的产生。因此，铜绿假单胞菌可能对其他细菌具有抑制作用。在这项研究中，对DSM 24564T型菌株的基因组进行了测序，注释和表征。全长5344419 bp的基因组及其七个质粒包含5227个蛋白质编码基因（3904个具有预测功能）和108个RNA基因。

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《Standards in Genomic Sciences》 |2013年第3期|403-419|共17页
作者
Paul G. Beyersmann; Olga Chertkov; Jörn Petersen; Anne Fiebig; Amy Chen; Amrita Pati; Natalia Ivanova; Alla Lapidus; Lynne A. Goodwin; Patrick Chain; John C. Detter; Manfred Rohde; Sabine Gronow; Nikos C. Kyrpides; Tanja Woyke; Meinhard Simon; Markus Göker; Hans-Peter Klenk; Thorsten Brinkhoff;
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biofilm motile indigoidine quorum sensing siderophores; Rhodobacteraceae; Alphaproteobacteria;

机译：生物膜运动靛蓝定额感应铁载体;红细菌科;丙酸杆菌;

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1. Genome sequence of Phaeobacter caeruleus type strain (DSM 24564T), a surface-associated member of the marine Roseobacter clade [J] . Paul G. Beyersmann, Olga Chertkov, J?rn Petersen, Standards in Genomic Sciences . 2013,第3期

机译：海洋玫瑰红杆菌进化枝的表面相关成员，Phaeobacter caeruleus型菌株（DSM 24564T）的基因组序列。
2. Genome sequence of Phaeobacter inhibens type strain (T5T), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens [J] . Marco Dogs, Sonja Voget, Hazuki Teshima, Standards in Genomic Sciences . 2013,第2期

机译：Phieobacter inhibens型菌株（T5T）的基因组序列，是次生代谢产物，代表海洋Roseobacter进化枝，并且对Phaeobacter inhibens的物种描述进行了修订
3. Genome sequence of Phaeobacter inhibens type strain (T5T), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens [J] . Marco Dogs, Sonja Voget, Hazuki Teshima, Standards in Genomic Sciences . 2013,第2期

机译：Phieobacter hihibens型菌株（T5T）的基因组序列，代表海洋Roseobacter进化枝的次生代谢产物，以及对Phieobacter inhibens种类描述的修正
4. A comparison of genome sequences among the H5N1 strains of Hong Kong,Thailand, Vietnam and China [C] . Wei Zhao, Cheng-song Wan, Hong Cao, The 11th World Multi-Conference on Systemics, Cybernetics and Informatics(WMSCI 2007) Jointly with the 13th International Conference on Information Systems Analysis and Synthesis(ISAS 2007) . 2007

机译：香港，泰国，越南和中国的H5N1毒株基因组序列比较
5. Characterization of sequence variation in viral genomes of wild type and vaccine strains of infectious laryngotracheitis virus (ILTV) using next generation sequencing. [D] . Chandra, Yohanna Gita. 2011

机译：使用下一代测序技术对野生型和传染性喉气管炎病毒（ILTV）疫苗株的病毒基因组中的序列变异进行表征。
6. Genome sequence of Phaeobacter caeruleus type strain (DSM 24564T) a surface-associated member of the marine Roseobacter clade [O] . Paul G. Beyersmann, Olga Chertkov, Jörn Petersen, 2013

机译：海洋玫瑰红杆菌进化枝的表面相关成员Phaeobacter caeruleus型菌株（DSM 24564T）的基因组序列。
7. Genome sequence of Phaeobacter caeruleus type strain (DSM 24564T), a surface-associated member of the marine Roseobacter clade [O] . Paul G. Beyersmann, Olga Chertkov, Jörn Petersen, 2013

机译：海洋玫瑰红细菌进化枝的表面相关成员，Phaeobacter caeruleus型菌株（DSM 24564T）的基因组序列

Genome sequence of Phaeobacter caeruleus type strain (DSM 24564T), a surface-associated member of the marine Roseobacter clade

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