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Dynamical properties and energy landscape of simple globular proteins

机译:简单球状蛋白的动力学性质和能级

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Analysis of dynamic properties of a simple globular protein, myoglobin, has demonstrated that it possesses a hier-archically organized energy landscape. It shows two types of specific protein motions, besides vibrations: 1) individual motions of small atomic groups - transitions between conformational substates (CS) of the lower tier 2, and 2) cooperative motions of secondary structure elements (α-helices) - transitions between CS of the upper tier 1. The profile of macromo-lecule dynamic properties is highly heterogeneous. Only vibrations occur near the active center. The number of CS grows towards the periphery where specific type 1 and 2 motions become predominant. Such a picture is consistent with the concept of a protein as 'a random copolymer slightly edited in the vicinity of the active center'.
机译:对简单的球状蛋白肌红蛋白的动力学性质的分析表明,它具有层次结构有序的能量分布。它显示了两种类型的特定蛋白质运动,除了振动:1)小原子团的单个运动-下层2的构象子状态(CS)之间的过渡,以及2)二级结构元素的合作运动(α-螺旋)-过渡在上层CS之间。宏观分子动态特性的分布是高度异质的。活动中心附近只会发生振动。 CS的数量向着特定类型1和2动作占主导地位的外围增长。这样的图与蛋白质的概念一致,蛋白质是“在活性中心附近稍加编辑的无规共聚物”。

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