PATTERNHUNTER II: HIGHLY SENSITIVE AND FAST HOMOLOGY SEARCH

Ming Li; Bin Ma; Derek Kisman; John Tromp

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PATTERNHUNTER II: HIGHLY SENSITIVE AND FAST HOMOLOGY SEARCH

机译：PATTERNHUNTER II：高度敏感和快速的同源性搜索

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Extending the single optimized spaced seed of PatternHunter20 to multiple ones, PatternHunter II simultaneously remedies the lack of sensitivity of Blastn and the lack of speed of Smith–Waterman, for homology search. At Blastn speed, PatternHunter II approaches Smith–Waterman sensitivity, bringing homology search methodology research back to a full circle.

机译：将PatternHunter20的单个优化间隔种子扩展为多个种子，PatternHunter II同时可以弥补同源搜索的Blastn敏感性不足和Smith-Waterman速度不足的问题。以Blastn的速度，PatternHunter II接近Smith-Waterman的灵敏度，将同源性搜索方法学研究带回了一个完整的圈子。

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《Journal of Bioinformatics and Computational Biology》 |2004年第3期|共23页
作者
Ming Li; Bin Ma; Derek Kisman; John Tromp;
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正文语种 eng
中图分类细胞生物学;
关键词
Homology search; sensitivity; speed; spaced seeds;

机译：同源性搜索灵敏度速度间隔种子;

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1. PATTERNHUNTER II: HIGHLY SENSITIVE AND FAST HOMOLOGY SEARCH [J] . Ming Li, Bin Ma, Derek Kisman, Journal of Bioinformatics and Computational Biology . 2004,第3期

机译：PATTERNHUNTER II：高度敏感和快速的同源性搜索
2. PATTERNHUNTER II: HIGHLY SENSITIVE AND FAST HOMOLOGY SEARCH [J] . Ming Li, Bin Ma, Derek Kisman, Journal of Bioinformatics and Computational Biology . 2004,第3期

机译：PATTERNHUNTER II：高度敏感和快速的同源性搜索
3. PatternHunter: faster and more sensitive homology search [J] . Bin Ma, John Tromp, Ming Li Bioinformatics . 2002,第3期

机译：PatternHunter：更快，更敏感的同源性搜索
4. Patternhunter Ii: Highly Sensitive and Fast Homology Search [C] . Ming Li, bin Ma, derek Kisman, International Conference on Genome Informatics . 2003

机译：Patternhunter II：高度敏感和快速的同源搜索
5. I. Stereochemistry of cyclopropane formation involving group (IV) organometallic complexes. II. Slower stoichiometric and faster catalytic reduction of aldehydes by the PPh(3) substituted hydroxycyclopentadienyl ruthenium hydride [2,5-Ph(2)-3,4-Tol(2)(eta(5)-C(4)COH)]Ru(CO)(PPh(3))H: A highly chemoselective catalyst for hydrogenation of aldehydes over ketones. [D] . Strotman, Neil Adham. 2005

机译：I.涉及（IV）族有机金属配合物的环丙烷形成的立体化学。二。由PPh（3）取代的羟基环戊二烯基氢化钌[2,5-Ph（2）-3,4-Tol（2）（eta（5）-C（4）COH）] Ru的化学计量较慢和较快的醛催化还原（CO）（PPh（3））H：一种高度化学选择性的催化剂，用于醛在酮上的氢化。
6. lordFAST: sensitive and Fast Alignment Search Tool for LOng noisy Read sequencing Data [O] . Ehsan Haghshenas, S Cenk Sahinalp, Faraz Hach -1

机译：lordFAST：灵敏且快速比对的搜索工具可降低嘈杂的朗读序列数据
7. PatternHunter II: Highly Sensitive and Fast Homology Search [O] . Ming Li, Bin Ma, Derek Kisman, 2003

机译：patternHunter II：高度敏感和快速的同源搜索
8. Optimization of Electrochemical-Etching Parameters for Highly Sensitive CR-39 Fast Neutron Dosimeters [R] . Gammage, R. B., Chowdhury, A. 1981

机译：高灵敏度CR-39快中子剂量计电化学蚀刻参数的优化

PATTERNHUNTER II: HIGHLY SENSITIVE AND FAST HOMOLOGY SEARCH

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