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The Structural Similarity of Predicted Chickens MHC Regulatory Factors and Bacterial Organisms

机译:预测鸡MHC调节因子和细菌生物的结构相似性

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Objective: Pathogen microorganisms use pathogen-encoded factors resembling host factors to elude the host's immune system. Based on molecular mimicry, a hypothesis was developed based on the bioinformatics analysis which represents the microorganism's interference with chicken MHC regulatory factors. Method: The sequences of chicken NLRC5 and CIITA were retrieved from NCBI and ensemble database; so that the regulatory factors were predicted by using STRING tools. Also, Swiss model tools were used to predict the 3D structure of these molecules. The Cluspro 2.0 tool was used inorder to reveal the intramolecular interaction. Moreover, to find out the sequence and structure similarity with microorganism, UniPortKB, VAST and 3D Match tools were used as the experimental instruments.
机译:目的:病原体微生物使用类似于宿主因子的病原体编码因素来逃避宿主的免疫系统。 基于分子模拟,基于生物信息学分析开发了假设,该分析代表了微生物的干扰性对鸡MHC调节因子的干扰。 方法:从NCBI和集合数据库中检索鸡NLRC5和CIITA的序列; 因此,通过使用字符串工具预测监管因素。 此外,瑞士模型工具用于预测这些分子的3D结构。 Cluspro 2.0工具是使用否决分子内交互的。 此外,要找出与微生物,UniPortkB,Vist和3D匹配工具的序列和结构相似之处被用作实验仪器。

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