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首页> 外文期刊>Marine genomics >De novo transcriptome assembly of the Qatari pearl oyster Pinctada imbricata radiata
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De novo transcriptome assembly of the Qatari pearl oyster Pinctada imbricata radiata

机译:Qatari珍珠牡蛎Pinctada Imbricata radiata的De Novo转录组装配

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The pearl oyster Pinctada imbricata radiata is an iconic species in Qatar, representing an integral part of the nation's cultural heritage and one of the main economic foundations upon which the nation developed. During the early part of the 20th century, nearly half the Qatar population was involved in the pearl oyster industry. However, the fishery has undergone steady decline since the 1930s, and the species is now under threat due to multiple confounding pressures. This manuscript presents the first de novo transcriptome of the Qatari pearl oyster assembled into 30,739 non-redundant coding sequences and with a BUSCO completeness score of 98.4%. Analysis of the transcriptome reveals the close evolutionary distance to the conspecific animal Pinctada imbricata fucata but also highlights differences in immune genes and the presence of distinctive transposon families, suggesting recent adaptive divergence. This data is made available for all to utilise in future studies on the species.
机译:珍珠牡蛎Pinctada Imbricata Radiata是卡塔尔的标志性物种,代表了全国文化遗产的一个组成部分,以及国家发展的主要经济基础之一。 在20世纪的早期,近一半的卡塔尔人口参与了珍珠牡蛎行业。 然而,渔业自20世纪30年代以来经历了稳定的下滑,目前由于多种混杂性压力,物种遭到威胁。 该稿件介绍了Qatari珍珠牡蛎的第一张Novo转录组合成30,739个非冗余编码序列,Busco完整性得分为98.4%。 转录组的分析揭示了与面包型动物Pinctada Imbricata Fucata的紧密进化距离,但也突出了免疫基因的差异以及独特的转座子家族的存在,表明最近的适应性分歧。 此数据可供所有以用于对物种的未来研究。

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