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Chromosome-specific microsatellite multiplex sets for linkage studies in the domestic dog.

机译:用于家犬连锁研究的染色体特异性微卫星多路复用集。

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摘要

To expedite linkage studies and positional cloning efforts in the dog, Minimal Screening Set 2 (MSS-2) of 327 canine microsatellite markers has been multiplexed into chromosome-specific panels. MSS-2 provides 9 Mb coverage of the canine genome with no gaps larger than 17.1 Mb and is the most recent and comprehensive set of microsatellites available for whole-genome scans. Markers were labeled with fluorescent dyes based on locations and expected product sizes to facilitate the multiplexing of a maximum number of markers for each chromosome. All markers are amplified using a single thermal cycling program and PCR mix and are optimized for resolution on an ABI 3100 genetic analyzer. Sixty-nine chromosome-specific panels were created by coamplification of a maximum number of markers and subsequent coloading of the remaining markers.
机译:为了加快狗的连锁研究和位置克隆工作,已将327个犬微卫星标记的最小筛选集2(MSS-2)复用到了染色体特异性面板中。 MSS-2提供了9 Mb的犬科动物基因组覆盖范围,且没有大于17.1 Mb的缺口,是可用于全基因组扫描的最新,最全面的微卫星集。根据位置和预期的产物大小,用荧光染料标记标记,以促进每个染色体的最大标记数的多重化。使用单个热循环程序和PCR混合物扩增所有标记,并针对ABI 3100基因分析仪上的分辨率进行优化。通过共扩增最大数量的标记并随后共加载其余标记来创建69个染色体特异性面板。

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