DCCP and DICP: Construction and Analyses of Databases for Copper- and Iron-Chelating Proteins

Hao Wu; Yan Yang; Sheng-Juan Jiang; Ling-Ling Chen; Hai-Xia Gao; Qing-Shan Fu; Feng Li; Bin-Guang Ma; Hong-Yu Zhang

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DCCP and DICP: Construction and Analyses of Databases for Copper- and Iron-Chelating Proteins

机译：DCCP和DICP：铜和铁螯合蛋白数据库的构建和分析

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Copper and iron play important roles in a variety of biological processes, especially when being chelated with proteins. The proteins involved in the metal binding, transporting and metabolism have aroused much interest. To facilitate the study on this topic, we constructed two databases (DCCP and DICP) containing the known copper- and iron-chelating proteins, which are freely available from the website http://sdbi.sdut.edu.cn/en. Users can conveniently search and browse all of the entries in the databases. Based on the two databases, bioinformatic analyses were performed, which provided some novel insights into metalloproteins.

机译：铜和铁在各种生物过程中都起着重要作用，尤其是与蛋白质螯合时。与金属结合，转运和代谢有关的蛋白质引起了人们的极大兴趣。为了促进对此主题的研究，我们构建了两个数据库（DCCP和DICP），其中包含已知的铜螯合蛋白和铁螯合蛋白，可从http://sdbi.sdut.edu.cn/cn免费获得。用户可以方便地搜索和浏览数据库中的所有条目。基于这两个数据库，进行了生物信息学分析，为金属蛋白提供了一些新颖的见解。

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来源
《Genomics Proteomics & Bioinformatics》 |2005年第1期|p.52-57|共6页
作者
Hao Wu; Yan Yang; Sheng-Juan Jiang; Ling-Ling Chen; Hai-Xia Gao; Qing-Shan Fu; Feng Li; Bin-Guang Ma; Hong-Yu Zhang;
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作者单位

Shandong Provincial Research Center for Bioinformatic Engineering and Technique, Shandong University of Technology, Zibo 255049, China;

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原文格式 PDF
正文语种 eng
中图分类生物科学;
关键词
copper and iron; database; primary sequence analysis; secondary structure prediction; SCOP classification;

机译：铜铁;数据库;一级序列分析;二级结构预测;SCOP分类;

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专利

1. DCCP and DICP: Construction and Analyses of Databases for Copper- and Iron-Chelating Proteins [J] . Hao Wu, Yan Yang, Sheng-Juan Jiang, 基因组蛋白质组与生物信息学报（英文版） . 2005,第001期

机译：DCCP和DICP：铜和铁螯合蛋白数据库的构建和分析
2. STUDIES ON THE PROCEDURE FOR THE CONSTRUCTION OF CELLULAR PROTEIN DATABASES EMPLOYING MICRO TWO-DIMENSIONAL ELECTROPHORESIS - AN HL-60 PROTEIN DATABASE [J] . Manabe T., Kawai M., Yamamoto H. Electrophoresis: The Official Journal of the International Electrophoresis Society . 1995,第3期

机译：二维电泳的细胞蛋白数据库构建过程的研究-HL-60蛋白数据库
3. Large-scale identification of N-glycosylated proteins of mouse tissues and construction of a glycoprotein database, GlycoProtDB [J] . Kaji H., Shikanai T., Sasaki-Sawa A., Journal of proteome research . 2012,第9期

机译：小鼠组织中N-糖基化蛋白的大规模鉴定和糖蛋白数据库GlycoProtDB的构建
4. Improvements in ProMode (a Database of Normal Mode Analyses of Proteins) [C] . Hiroshi Wako, Masaki Kato, Shigeru Endo International Conference on Genome Informatics . 2003

机译：徽章的改进（蛋白质的正常模式分析数据库）
5. Identification of Protein Isoforms in Mass Spectrometry Based Proteomic Analyses Using Alternative Splicing Databases. [D] . Chang, Kung-yen. 2011

机译：使用替代剪接数据库，在基于质谱的蛋白质组学分析中鉴定蛋白质同工型。
6. DCCP and DICP: Construction and Analyses of Databases for Copper- and Iron-Chelating Proteins [O] . Hao Wu, Yan Yang, Sheng-Juan Jiang, 2005

机译：DCCP和DICP：铜和铁螯合蛋白数据库的构建和分析
7. DCCP and DICP: Construction and Analyses of Databases for Copper- and Iron-Chelating Proteins [O] . Wu Hao, Yang Yan, Jiang Sheng-Juan, 2005

机译：DCCP和DICP：铜和铁螯合蛋白数据库的构建和分析

DCCP and DICP: Construction and Analyses of Databases for Copper- and Iron-Chelating Proteins

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