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On the driving forces in the type-II enzymes - Restriction molecular motors

机译:关于II型酶的驱动力-限制性分子马达

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The motion of the type-II enzyme-DNA complex along the DNA chain is described in the framework of the model of chiral kink movement under the action of a transverse electric field of moderate strength and the model of proper kinetic equations. The basic enzyme characteristics are estimated. The energy released during catalytic reactions due to the participation of certain metal-ions is used to produce bending and twisting of the DNA, the angular motion, and the linear movement of the enzyme along the DNA chain. When water molecules and ions are expelled from the protein-DNA interface, a large longitudinal force appears in the motor, which strives to turn the deformed part of the DNA chain around the transverse axis, which can scissor the DNA chain in some "weak" place inside the enzyme groove.
机译:II型酶-DNA复合物沿着DNA链的运动在中等强度的横向电场作用下的手性扭结运动模型和适当的动力学方程模型的框架内描述。估计基本的酶特性。由于某些金属离子的参与,在催化反应过程中释放的能量用于产生DNA的弯曲和扭曲,角运动以及酶沿着DNA链的线性运动。当水分子和离子从蛋白质-DNA界面排出时,马达中会出现很大的纵向力,力会试图使DNA链的变形部分绕横轴转动,从而可以将DNA链剪成“弱”状态置于酶槽内。

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